LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele08g2081	ATGGATTTTGATTGGATAGGCGCACAATTAGGAAAGAAAGGAAATAAAGTAGACAATGACACACATGAATTTCAAACTCTACATATTTACCAAGCTTCTGTTGAAAGATTATATACAGAGATTCTAAGAAATATCATCAGAAAAATGAAAAGTTCATCCTCACTTGGTTGTAGAGTGGTTCTGCAGAAAAATAAGCCCTATATCGCAATGATCTTCATACAGTTTGTGTATTCAGGCATGGCTTTGCTCTCTAAGGCTGCAATCTCCAAGGGGATGAACCCTTATGTGTTTGTTGTCTATAGGCAAGCCTTTGCTTCAATTGCCTTATCACCATTTGCTTTCTTTGACAGTAAGCAGGCTACTCCCTTGTCATACACCTTGATCTGCAAAATCTTCCTCGTTTCCTTATTTGGGTTAACATTGAGTTCAAGCCTTTACTATGTTTCAATCAACTATATTACTGCAACGTTTGCTGCAGCATCCACAAACACAGTTCCTGCCATTACTTTCATCATGGCTGTTCTATTAAGAGTGGAAAGCGTATCTATAAAACACATGTATGGTGTGGCCAAGATTCTAGGTTCTGTTCTGAGCCTTTCCGGGGCAATTATATTTGCTTTAGTGAAAGGACCTCCTCTAGAATTCATGAAGTGGTATCCTCAAAATCAGGAGCATCAGTCTTCTATGTCACTAACAAAGGGTCACTCCACAATGGATTTAATCAAAGGTCCTATCATGATGCTTTCTGCTAACACTGCATGGTCCTTGTGGCTCATATTGCAAGGTTTCATTGTAAAGCAATACACCGCGAAGTTTCGGCTCACCACCCTGCAATGTTTCTTCAGCTGCATGCAGTCTGCTGTTTTAGCCGTTGCAATTGAAAGAGATCCTTCAGCATGGAAGCTTGGATGGGACATTAATCTTCTTTCTGTGGCCTACTGCGGTCTAATTGTGACAGGGATTTGTTATTGGCTTCAAGTATGCACAATAGAGACTAAAGGACCCGTTTTTACAGCAATGTTTACCCCTCTGGCTCTTATCATCACAGCAATATTCTCAGCTCTTCTGTGGAAGGAATCACTTTACTGGGGAAGTGTTGGAGGAGCAATGCTATTAGTGGTTGGACTCTACAGTGTATTGTGGGGGAAGAACAGAGAGTGTCCCAAACCAGAAAGCCATCATCAAAATGAGGAAGACACAAGTGATTCAAAATTAGACGATACCACGTTGGAGTGCATTATTCACCACTAA	1251	0.4077	MDFDWIGAQLGKKGNKVDNDTHEFQTLHIYQASVERLYTEILRNIIRKMKSSSSLGCRVVLQKNKPYIAMIFIQFVYSGMALLSKAAISKGMNPYVFVVYRQAFASIALSPFAFFDSKQATPLSYTLICKIFLVSLFGLTLSSSLYYVSINYITATFAAASTNTVPAITFIMAVLLRVESVSIKHMYGVAKILGSVLSLSGAIIFALVKGPPLEFMKWYPQNQEHQSSMSLTKGHSTMDLIKGPIMMLSANTAWSLWLILQGFIVKQYTAKFRLTTLQCFFSCMQSAVLAVAIERDPSAWKLGWDINLLSVAYCGLIVTGICYWLQVCTIETKGPVFTAMFTPLALIITAIFSALLWKESLYWGSVGGAMLLVVGLYSVLWGKNRECPKPESHHQNEEDTSDSKLDDTTLECIIHH	416

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele08g2081	416	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	100	199	-	-
	Lele08g2081	416	Pfam	EamA-like transporter family	242	380	IPR000620	GO:0016020
	Lele08g2081	416	Pfam	EamA-like transporter family	65	199	IPR000620	GO:0016020
	Lele08g2081	416	PANTHER	WAT1-RELATED PROTEIN	65	394	IPR030184	GO:0016020\|GO:0022857
	Lele08g2081	416	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	304	385	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele08g2081	Lele-ChrLele08	17117934	17122244	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele08g2081	57	414	Nodulin-like Gene Family	AT5G07050	36.243	4.89e-87	268