Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2075 ATGGGAAGCACTGAAGGGATTGAAGGAGAGCGCGTGGAAGATGTTGGATTGAAAGAGACTGTATATGTTGCCGTGGGGAAGAATATAGGGAAGAGCAAACAGCTACTGCTCTGGGCAGTGCATAATTGTGCCGAAAAGAAGATATGCGTGCTTCATGTTCATCGGCCGGAGCCTATAAATTCTTTGACAGACAGAAAACTCAACGGGATTGAACCGGAAGGCAATCAAATAAAGGCAGTCCAGGAACAGGAAAGACAAAAAGTGCACGAACTTTTAGACCAATATGTTCTCCTTCTTAGCCTGGCAGGGGTAGAGACCAATAAAATATTGATTGAAATGGACAGTATTGAGAAAGGAATTTTACATGCTATTGCTCAACACAATATCAGATGGCTTGTCATGGGAGCAGCTGGAGATAGATATCAATCAGGTAAACTGGCAGAGGAAGAGTCCAAGAAAGCTGTTCTTGTACTTGAGCAAGCATCAGTATCCTGTAATATTTGGTTCATTCACAAGGGCAACCTCATATATACAAGCGCAGATAGTAAACATATATCTGAAATTAAGACTGTCCCGTCATTATTGGTGCTTAGTTCAACTACAGAAGGCAAACAATCTGAGATCAGTTCTGAATGTACTCCTAGTTCACAGAAATATTTAGATGCTGAAAATATGGAAGGAATGCTCAGAAATTTTAGTCATTGTTCTGCAGAATCAGTAAAATCAAGTACTAAGTTGACAGATTTGCTGTCTCTTGAGGAGGCAAGTGACGCACAGGAGGACACAAGAGAACAAGATGGAAGACTGGAACTAGCTAATGTAGATGCTACGTGCTCCAGATCAAAAGAACTTGTAGGGGCTGTGGAGAGCAGCAATGTAGAAGACAACAGCACTCCGGAGGCGGATGCATTAGAAAGCTTGTGTGCTGATGAGATAAGTAGAAGAAGAGAGCTTGAAGAACTATTGGCTGGGGAAAAGCAAGAATTACAAAAACTGAAAGATCAACAAGATGAAATCCAGGGAAAACTGCAAATGATCCAAAACCAAAATTCAGCACTTACCTGCCAATTTGTTGAGTCCCAGACTGTGGTGACAGAGTTGGAGGAGAAAATCTTATCAGCAGTGGAACTCTTGATAAGCTTCAAGGACAAGCGGGATAAGTTAAAGATTGAGCATTCAGATGCAGTAAGGGAAGTCAAGTTGAGGAAGTTTGTAAACGCAGATGCTGAATATCCTCATGGAACAGAATTTCCTACATTTTCATTCTTAGAGATCAATGAAGCAACTAATGATTTTGATCCATCTTGGAAGATTGGAGAGGGAAGGTATGGAAGTGTTTACAAAGGATTGCTTCGCAATATGCAAGTTGCCATAAAGATGTTGCCCTCATATGGTTGTCAGAGCCATCTTAACTTCCAACACCAGGTTGAGTTTTTGAGTAGGGTAAGACATCCAAACCTTGTAGCACTGATCGGAAGCTGCCAAGAATCTAGGTCACTTGTCTATGATTACCTTAATAATGGCAGCCTTGAGGACCACCTTGCCCGCAAAGACAAAACTCCACTTTCTTGGCAAATTCGAATATCCATTGCTGCTGACGTATGCTCTGCTCTTATCTTCCTTCACTCCAGCAAGCCTTGTATAATCTTTGGGAATTTGAAGCCGAGTAAAATTCTCCTTGATGTAAACTTTGTTGCCAAACTTAGTGTTTTGGGCATTTCTTCTTTGGTCCAGTCCAGTGGGCATTCAGCTGACAGTAAAACAACAGTTGACAACCGAAATGAAAGTTTGGTGTATGTGGATCCAGAATTTCTTCTCACTGGGAAGTTCACACCAGAATCTGATGTGTATTCGTTTGGCATCATATTGTTACAACTTTTAACTGGCAGACCTCTTTCAGGAATAGTAAGGGATACAAAATGTGCATTGGAGAAGGAAAATCTCAAAGCGGTATTGGACATTTCAGCTGGAGAATGGCCACTTTATCAAGTTGAACAGCTAGCATATTTGGCATTGAGGTGTTCTGAAAAGACTCGGCTGAATCGGCCAGACCTATTATCAGAAATCTGGAGTGTTCTTGGACAATTACGAACTTCATGCAGTAACGTGTTGCCATATTCAACTTCCAAGAAGCTTCATCGTCCTCCTTCTCACTTTGTCTGCCCCATATTTCAGGAGGTCATGAAAGATCCTTATATAGCTGCAGATGGCTTCACGTATGAAGAAGACGCAATAAGAGGATGGTTGGATAGCGGTCACAACACTTCGCCAATGACAAACCTTAAGCTTGAACATACCAACCTGGTGCCTAACTATGCATTACTTAATGCGATTCAGGAGTGGCAGCACCTATAA 2355 0.4174 MGSTEGIEGERVEDVGLKETVYVAVGKNIGKSKQLLLWAVHNCAEKKICVLHVHRPEPINSLTDRKLNGIEPEGNQIKAVQEQERQKVHELLDQYVLLLSLAGVETNKILIEMDSIEKGILHAIAQHNIRWLVMGAAGDRYQSGKLAEEESKKAVLVLEQASVSCNIWFIHKGNLIYTSADSKHISEIKTVPSLLVLSSTTEGKQSEISSECTPSSQKYLDAENMEGMLRNFSHCSAESVKSSTKLTDLLSLEEASDAQEDTREQDGRLELANVDATCSRSKELVGAVESSNVEDNSTPEADALESLCADEISRRRELEELLAGEKQELQKLKDQQDEIQGKLQMIQNQNSALTCQFVESQTVVTELEEKILSAVELLISFKDKRDKLKIEHSDAVREVKLRKFVNADAEYPHGTEFPTFSFLEINEATNDFDPSWKIGEGRYGSVYKGLLRNMQVAIKMLPSYGCQSHLNFQHQVEFLSRVRHPNLVALIGSCQESRSLVYDYLNNGSLEDHLARKDKTPLSWQIRISIAADVCSALIFLHSSKPCIIFGNLKPSKILLDVNFVAKLSVLGISSLVQSSGHSADSKTTVDNRNESLVYVDPEFLLTGKFTPESDVYSFGIILLQLLTGRPLSGIVRDTKCALEKENLKAVLDISAGEWPLYQVEQLAYLALRCSEKTRLNRPDLLSEIWSVLGQLRTSCSNVLPYSTSKKLHRPPSHFVCPIFQEVMKDPYIAADGFTYEEDAIRGWLDSGHNTSPMTNLKLEHTNLVPNYALLNAIQEWQHL 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2075 784 Pfam U-box domain 716 781 IPR003613 GO:0004842|GO:0016567
Lele08g2075 784 Gene3D Phosphorylase Kinase; domain 1 404 504 - -
Lele08g2075 784 PANTHER OS02G0152300 PROTEIN 20 780 - -
Lele08g2075 784 ProSitePatterns Protein kinases ATP-binding region signature. 438 459 IPR017441 GO:0005524
Lele08g2075 784 CDD STK_N 20 173 - -
Lele08g2075 784 Gene3D Transferase(Phosphotransferase) domain 1 505 702 - -
Lele08g2075 784 Gene3D HUPs 12 140 IPR014729 -
Lele08g2075 784 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 714 784 IPR013083 -
Lele08g2075 784 SUPERFAMILY RING/U-box 707 782 - -
Lele08g2075 784 SMART Ubox_2 718 781 IPR003613 GO:0004842|GO:0016567
Lele08g2075 784 SUPERFAMILY Protein kinase-like (PK-like) 412 685 IPR011009 -
Lele08g2075 784 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 33 139 - -
Lele08g2075 784 CDD RING-Ubox_WDSUB1_like 719 760 - -
Lele08g2075 784 Pfam Protein tyrosine and serine/threonine kinase 437 685 IPR001245 GO:0004672|GO:0006468
Lele08g2075 784 ProSiteProfiles U-box domain profile. 714 784 IPR003613 GO:0004842|GO:0016567
Lele08g2075 784 ProSiteProfiles Protein kinase domain profile. 432 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2075 784 Coils Coil 301 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2075 Lele-ChrLele08 16508733 16531914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2075 65 783 U-box Gene Family AT3G49060 45.370 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele08g2075 PK_Tyr_Ser-Thr 5.1e-34 CL0016