Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2074 ATGCCAGTAGCGAAACTTAAAGCTTCTAGAAGTCCAGATGTCATGAAAGCAGAGGCTGGAAATGATTCCTTAGATCCCATAATCAGACAAGCAATTGGCAAAGAACCTTTCCTTTCTTTTTCAAGGGCTGGTGACAGCCCTGTGCAGTGGATTCAATTACTCCATGCTTTAGATCAGCAAGAACTCCCAGGTTGGCCTGTGCTAACTCCTCTGAAGGTTCAGGTGGAGAAGTGTGACAAGTGTTCTCAACAATTTTGCTCTCAAATTAACTACAGAAGACATCTTCGTGTGCAACATCGATTAAAAAAACTTGATAAGGATTCTACTAACAACAGAGATCTGTTAGGGGCATATTGGGATAAGCTTTCTCTAGAAGAGGCGAAGGAAGTTTTATCATTTAATAATGTGATGCTGGAGGAAGTTCCAGGGTCTGCTATTTTAAAAGCTCTGGCAACCCATATTCGAAAACAAGGATTTTCATCATTTCCACAATATCATCTGAAGGCTGGTTCTGCCCTTTTGGATATTGTTCAAGCTAGATACAGTTTTCCTATATCTTCACAGGAGTTGTTTGGTGTACTTGATGATGCCAGTGAAAAAACATTTTTATGTGGAAATGCGGTTTCTATGAAGAAATATATTCTTGATGGAGAGGCTGGAAAGATTAGTCTTGAACCAAAAAACGTTGTTGCTTGCACAAGTTTGTTGCTAGAGCAGATTTTGGTAAAAGCATGGCTTGCTGACAAGGATGTTGAAGCATTAAGATGGCAGAAGCTACTGGTGGAGGAAGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTGGAGAAGAAACGCCAGAAAAAGCTTAGGCAAAAAGAACATAGGGTGAGGGAAAAAAAACATGAGGATGAGGCAGAAGTTAAAGAGAACATTAGTAACACTGTAGAGTCTGTATCACCAGCTGAAGCATCTTTGGATTCATCTGACTTCGAAGAACATCATGAAAATACATTTACTGATCATGTTCCTTTGCAACTTGTACCATTTCAAAGCCCAGACACCAAAGAAGTTTTAACTGGGAGAAATTCTCAGTCAGGCTATGATCTTGGCAGGGATCAGAACATTGAACGACAGATAGCACTAGGAAATAATTATCGACATGCAGTGGTTGCTCAACGGCAGGCACTGTTGAAATCACAATTGACTGTAGCCAACGGTCACCATACAAACCAGAATTCTCAAATTCTGAAATTTGGAGTCATTAAGAGGCATGGAACCTGCCGTGACCAAAGTGCAGCTCCTATAGTTACTGGTAATAAAGTGTGGAGCCGAAAGCCAAAACCAGTAACTGATGGGATAACTTTAAAAGCCAGGCCACATAATGAACCAGACAAAGTTAAGAACCATCAACTATTGATAGGGTCTATATCTGTTGCTCTTAATAATTGCAATCAATCAAAAACTTATTTGGTGACACCTCAGGAGAACTGCATGGTTGACAATCTGAACAAGGAGAATAGTTCTCAGGAGAAGTCAGCTGTCCAGAATGGCAACAATCGGTTAGCAATTAAACTTTGGAGGCCTGTTTGCCGGCATGGATCAAAAGATACAAATTCAGTTCAAAACGGTGGTGAAGAAGCTTATTCAATTACCAGAAAGGGAGATGATCCAAACTTATTAGATGAAAGTTGTTTAAGGTTGTGTGACATAGATAATAGTATTAGTAGTTTTGAGAAAAATTCTTCCCTCCAAGAGGACTGTGCAGGTCCCGGAAGCTTCCAACAACTATCCAGCAATGCTGCAAAAGCCTTTTTAGCACAAAGATGGAAAGAAGCCGTTTCGTTGAATCATGTGACATTGGTTCTTTCACCTGACTCTGATCCTCCAAACTGTCACAAGATGCAGGATCCTAAACAGGCAGTATGTCCGTCTTCGAATGTCAACAGTCAAGGCATCCTTGCAAGTGCAGAGAACCAATTGTCTGCATCTTCAGAACGTGCTAGATCCAAACTTAGAGTTAAGCCTGAGAAGGGTATCAAAATAAAGTACATTCCCAAACAGAAAGCAGCAACCTATTAG 2061 0.4056 MPVAKLKASRSPDVMKAEAGNDSLDPIIRQAIGKEPFLSFSRAGDSPVQWIQLLHALDQQELPGWPVLTPLKVQVEKCDKCSQQFCSQINYRRHLRVQHRLKKLDKDSTNNRDLLGAYWDKLSLEEAKEVLSFNNVMLEEVPGSAILKALATHIRKQGFSSFPQYHLKAGSALLDIVQARYSFPISSQELFGVLDDASEKTFLCGNAVSMKKYILDGEAGKISLEPKNVVACTSLLLEQILVKAWLADKDVEALRWQKLLVEEEEAAQKRQAEILEKKRQKKLRQKEHRVREKKHEDEAEVKENISNTVESVSPAEASLDSSDFEEHHENTFTDHVPLQLVPFQSPDTKEVLTGRNSQSGYDLGRDQNIERQIALGNNYRHAVVAQRQALLKSQLTVANGHHTNQNSQILKFGVIKRHGTCRDQSAAPIVTGNKVWSRKPKPVTDGITLKARPHNEPDKVKNHQLLIGSISVALNNCNQSKTYLVTPQENCMVDNLNKENSSQEKSAVQNGNNRLAIKLWRPVCRHGSKDTNSVQNGGEEAYSITRKGDDPNLLDESCLRLCDIDNSISSFEKNSSLQEDCAGPGSFQQLSSNAAKAFLAQRWKEAVSLNHVTLVLSPDSDPPNCHKMQDPKQAVCPSSNVNSQGILASAENQLSASSERARSKLRVKPEKGIKIKYIPKQKAATY 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2074 686 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 684 - -
Lele08g2074 686 MobiDBLite consensus disorder prediction 290 304 - -
Lele08g2074 686 MobiDBLite consensus disorder prediction 281 314 - -
Lele08g2074 686 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 104 IPR013087 -
Lele08g2074 686 Coils Coil 260 280 - -
Lele08g2074 686 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2074 Lele-ChrLele08 16397635 16402795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2074 20 682 C2H2 Transcription Factor Family AT4G25610 40.882 3.79e-141 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele08g2074 None None None