Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2042 ATGAGGACGTTGCCCTTGGCAAAGGCAAAAAGGTCCTTGGAGGATGTGTTAGCCCACAAACAAGCTATTCCCTTCAGAAGGTTCTGTGGCGGTGTAGGGAGAACAGCCCAGGCAAAGAACAGGCGTTCTAATGGACAAGGACGATGGCCCGTTAAGTCAGCTAAATTCATTCTTGATTTGCTCAAGAATGCAGATAGTAATGCTGAACTTGTCCCGAAGGTAATAGAGGACTCAGATCTACATTTTAATAGACCCCCCCTCCCTGGGTTTACGGCATCTTTCCAGTTGAAAGGCTTGGATGTAGATGCTCTCTACATTTCTCACATCCAGGTTAATCAAGCACAAAAGCAAAGAGTTGACACCTGA 366 0.4617 MRTLPLAKAKRSLEDVLAHKQAIPFRRFCGGVGRTAQAKNRRSNGQGRWPVKSAKFILDLLKNADSNAELVPKVIEDSDLHFNRPPLPGFTASFQLKGLDVDALYISHIQVNQAQKQRVDT 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2042 121 Gene3D Ribosomal protein L22/L17 1 119 IPR036394 GO:0003735|GO:0005840|GO:0006412
Lele08g2042 121 SUPERFAMILY Ribosomal protein L22 2 70 IPR036394 GO:0003735|GO:0005840|GO:0006412
Lele08g2042 121 PANTHER 60S RIBOSOMAL PROTEIN L17 93 120 IPR005721 GO:0003735|GO:0006412|GO:0015934
Lele08g2042 121 Pfam Ribosomal protein L22p/L17e 2 118 IPR001063 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2042 Lele-ChrLele08 15723719 15724165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2042 1 121 Cytoplasmic Ribosomal Protein Gene Family AT1G27400 64.463 1.18e-47 149