Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2027 ATGGCTGAAGAAAACTGGGATCTCTCCGCCGTCGTGCGAGGTTGCAGATCCTTCACCTCCACAGCCACCGCCGCTGCCGCCACTGCTACAACTACTACAACTCTGTCGTCTTCTTCTTCAGCCAAGGCCGTTTCTTTACCATTAATCAAGCAAGAAAATGACATCTTCTCTTTTCCCAGTTTGATTCAACCCACAACCAATTGGTTCCAAGAACTTCACCAATTGTTCAGACCCTTTATCCCCACCATCACCACGACCATCACAACCACCACTATCTCCACTAGTGGTTGTGGCATATATCCCCATTCCTCTTCTGCAGGTGCAGGGTCCAGTAGCAATAATAATACTAATAGTATAAATATAAATTCTGCATCATCACTTGCTTCTTCTTCTTCTTCTTCTTCTTTGGCATCCAATATTGGGCCTCATTTTATGCCACAAACCTCGCCCTCCACTTCTGGCTTTCAGAGATTTCATGACCAACATGTACAAAAACTCCAACAAGAAGAGCAAATTCAACTAGTTCATCAGAAACAACCATTTCTAACATTACCAGGTCAGATCAGTGGCGGCGGCGGAAGTAATTCTGGTATGACTTTACCAAATATGCAAGCTGGTCAAGCAACCAGATCCAGGAAAAGAAAGAGTCAACAGAAGAGAATGGTTTGCCATGTGACAGCGGAAAATCTCACCGCAGATTCGTGGGCCTGGAGAAAATACGGTCAAAAGCCGATTAAAGGTTCTCCATACCCAAGATGTAGCAGTTCAAAAGGTTGTGGGGCCCGGAAGCAAGTAGAACGGAGCAATACTGAACCAGATATGTTCATCGTCACTTACACCGGAGACCACACGCATCCGAGACCCACCCATCGGAACTCGCTCGCCGGAAGTACAAGGAACAAACTGTCGACAACGACGACCCGTCAGCAGCCAGTCTCTCATGAATCTGGGTCACCAAGCAATACCGCAAACCGGGCATCGTCGTCTTCACAGCTTTCTCCGACGACGCCTTTAACAGCAGTGGCGGCAACGAACGACGAGTGCGCCGATGGACCCATGTTAAGCAATGAAGCGACTAGCCATTTTCCTGAGGATGAGTTCGACTTCGCTTCTCATGATGACATTTTAATACCAAACATGGCGGCCATGATGGATAAGTTCTTGCTTGGTGCTGGTGAGCTTCACGGCGGAATCGGACTTAGTGGCGGCGGGGGTAATATCACTAGCGGCGATCCGGCAGATGGGTCTTACCCGAATACTGAATCCGGATTGACTCCGAACCTACAACAGCACTTCTCCCCTCTCAGCCGGTCTAGTCCGGGCTGA 1326 0.4864 MAEENWDLSAVVRGCRSFTSTATAAAATATTTTTLSSSSSAKAVSLPLIKQENDIFSFPSLIQPTTNWFQELHQLFRPFIPTITTTITTTTISTSGCGIYPHSSSAGAGSSSNNNTNSININSASSLASSSSSSSLASNIGPHFMPQTSPSTSGFQRFHDQHVQKLQQEEQIQLVHQKQPFLTLPGQISGGGGSNSGMTLPNMQAGQATRSRKRKSQQKRMVCHVTAENLTADSWAWRKYGQKPIKGSPYPRCSSSKGCGARKQVERSNTEPDMFIVTYTGDHTHPRPTHRNSLAGSTRNKLSTTTTRQQPVSHESGSPSNTANRASSSSQLSPTTPLTAVAATNDECADGPMLSNEATSHFPEDEFDFASHDDILIPNMAAMMDKFLLGAGELHGGIGLSGGGGNITSGDPADGSYPNTESGLTPNLQQHFSPLSRSSPG 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2027 441 MobiDBLite consensus disorder prediction 404 441 - -
Lele08g2027 441 MobiDBLite consensus disorder prediction 183 220 - -
Lele08g2027 441 Gene3D WRKY domain 215 289 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele08g2027 441 MobiDBLite consensus disorder prediction 183 211 - -
Lele08g2027 441 Pfam WRKY DNA -binding domain 233 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele08g2027 441 MobiDBLite consensus disorder prediction 412 441 - -
Lele08g2027 441 MobiDBLite consensus disorder prediction 136 155 - -
Lele08g2027 441 SUPERFAMILY WRKY DNA-binding domain 225 288 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele08g2027 441 MobiDBLite consensus disorder prediction 246 335 - -
Lele08g2027 441 MobiDBLite consensus disorder prediction 290 335 - -
Lele08g2027 441 ProSiteProfiles WRKY domain profile. 226 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele08g2027 441 SMART WRKY_cls 231 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele08g2027 441 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 391 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2027 Lele-ChrLele08 15351169 15352782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2027 210 358 WRKY Transcription Factor Family AT5G52830 60.784 7.36e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele08g2027 WRKY 9.3e-19 CL0274