Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1998 ATGGCTGCATCCGGTTCGAGGCCCAATTCTTTTGGTCAGACCGAGGTTAACTGGGATAAGCTAGACAAACCTAAATTTTATGTTGTTGGAGCTGGAATCTTTACAGGCATTACAGTGGCCCTCTACCCAGTTTCTGTTGTGAAAACAAGACTGCAGGTTGCTTCAAAGGATTCTATAGAGAGAAACGCATTTTCTGTTCTAAAAGGATTGCTTAAATCAGATGGCTTTCCTGGTCTTTATAGAGGCTTTGGCCCAGTCATAACTGGTGCTGTTCCTGGCAGAATTATATTTATGACTGTCCTAGAGACCTCAAAGGTGGCCGCCATAAAAGTTCTTGAACCATTTAGACTATCTGAAACAACACAGGCAGCCTTAGCAAATGGAGTTGCAGGCATGATATCATCATTTTTGGCTCAAACAGTGTTTGTTCCAATTGATGTGGTTAGCCAAAAGATGATGGTTCAAGGATACTCAGGCCATGCTCGGTATAGTGGAGGTTTGGATGTTGTTCGTAAGGTTTTAAGATCTGATGGCATTAGGGGGTTGTATAGAGGGTTTGGTCTATCTGTTATGACTTATTCACCATCAAGTGCTGTATGGTGGGCAAGTTATGGTTCAAGCCAACGGTTGATTTGGAGATTTGTTGGACATGGAACGGAACATGAGGAAGGCACTCCTAATCTGCACAAAATAATGTTAGTTCAGGGTGCTGGAGGGATTATTGCTGCTGCAACTGCATCCTGCATTACAACCCCAGTGGATACTATTAAGACACGATTGCAGGTGATGGGACATGAAAACAGAAGCGGTATGAAAAAGGTTGTTAAGGATTTAATCAATGAGGATGGCTGGAAGGGCTTTTATAGAGGATTAGGTCCAAGATTTTTCAGCATGTCAGCATGGGGTACTTCAATGATATTGGCTTATGAATATTTGAAGCGCTTGTGTGCGAAAGATGAGTAG 963 0.4258 MAASGSRPNSFGQTEVNWDKLDKPKFYVVGAGIFTGITVALYPVSVVKTRLQVASKDSIERNAFSVLKGLLKSDGFPGLYRGFGPVITGAVPGRIIFMTVLETSKVAAIKVLEPFRLSETTQAALANGVAGMISSFLAQTVFVPIDVVSQKMMVQGYSGHARYSGGLDVVRKVLRSDGIRGLYRGFGLSVMTYSPSSAVWWASYGSSQRLIWRFVGHGTEHEEGTPNLHKIMLVQGAGGIIAAATASCITTPVDTIKTRLQVMGHENRSGMKKVVKDLINEDGWKGFYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1998 320 FunFam Mitochondrial substrate carrier family protein 27 319 - -
Lele08g1998 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 315 IPR018108 -
Lele08g1998 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Lele08g1998 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 24 107 IPR018108 -
Lele08g1998 320 Pfam Mitochondrial carrier protein 236 319 IPR018108 -
Lele08g1998 320 Pfam Mitochondrial carrier protein 124 211 IPR018108 -
Lele08g1998 320 Pfam Mitochondrial carrier protein 31 106 IPR018108 -
Lele08g1998 320 PRINTS Mitochondrial carrier protein signature 80 98 IPR002067 GO:0055085
Lele08g1998 320 PRINTS Mitochondrial carrier protein signature 36 54 IPR002067 GO:0055085
Lele08g1998 320 PRINTS Mitochondrial carrier protein signature 131 153 IPR002067 GO:0055085
Lele08g1998 320 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 6 319 - -
Lele08g1998 320 Gene3D Mitochondrial carrier domain 27 320 IPR023395 -
Lele08g1998 320 SUPERFAMILY Mitochondrial carrier 19 312 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1998 Lele-ChrLele08 14773451 14783483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1998 16 320 Chloroplast and Mitochondria Gene Families AT5G15640 72.638 1.27e-166 464