Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1988 ATGGGCAGCTTGAACCAGAACGTTGTCTCCAGTATGACTAAGCAACCGGCAATGACCATGTTTTTCCTCTTACTCTTCCTAATCCTTTTCTGTATCTGCGTAACCTCCTACACTCCTGTTGATAACTTCTTAGTCAACTGCGGTACCTCCGGCAATTCTCCTTCTTTAGATGGCCGCCGGAACTGGACCGGAGACAAAGACTCCACACTATTCTCTCCGATCGAATTCTCCAACAGCAACAACTCCTCAGTAAGTGCCGCCGCACTTGGTGAAATAATCCCTTACGACACCGCACGCCTCTCTCGTTCAGAATTCTCCTACTTGTTTCCTTTAAAGACCAACGGCCAAAAGTTTATTCGCCTTTATTTTTACCCATCTTCCTACGATGACCTCAACTTCCTCCGCTCCGACTCTTTCTTCTCCGTCAGGGTAGGGTCTCACACTCTTTTGAAAGACTTCAATGCTTCAATAATTGCCGATGACGACGCCGGCGTAGAAACCATTTTAAGAGAGTACTGCGTCAACATTTGTGACCCTAGTGAAGGGCTTAGCATAACCTTCACGCCCAACCCATCTCACCCAAACGCCTATGCTTTCGTCAATGGAATCGAAGTCGTCTCTATGCCAACGTTTCTTTACTACACCAAACCTGATGATCTTCAGTCTATGTTGTTAATTGACGGAACCCAACAGTATCCGGTCAAAAACAATAGAGCTCTTGAGACGGTGTACAGAACCAATGTTGGTGGGAGCCAGATTCCTAACGAACATGATACCGGCATGTTTCGTTATTGGGACCAGGATATTGCCTACTTGGAGAAGGAGCACCCGCGTAGTGTATCAGCAGGTTTTGCTTTAAAGCCAATCTACAAAAATTATCCAAATTATACTGCACCGGACGAAGTATACATGACAGCTCGAAACTATGGAATGAACCAGACGTCCAACTTTAATGTGACTTGGGAGTTTGAAGTGGACTCTAATTTTACTTACATGGTGAGACTTCACTTTTGTGAGTTTGACGAAGCCATTCAACAAGCTGGAGAAAGAGTTTTTCAAATCTTCATAAATGATGTTTTGGTGGAGCCTCTAGCCGATGTGATGTTGTGGACTCAGATACTGGTTCCAGTTCATAGGGACTATGCCGTGTCGATGCCGAGACATGGAAGCTTGAAGAAGCTGAATCTTTCAATTAAGTTGCAACCACACCCAACCGCAAGAAGCATTTACAGAGATGTTTTATTGAATGGTATTGAAATTTTTAAAATAAGTGACTTCAGAAACAATCTCGGAGGTTCTAATCCCGATCAACGTCCTTCTCCCTCAGTATTGCTTCCAAAGGTATCTAACAACTCAGTATTGCTTCCAAAGGTACCTAACAAGAATCCCCCAAAAATGAGAGTAATTTCCATAGTTGTGGGGTCAGCTTCCGGCTTCATTCTGCTATCTCTCATCATTTTGCTTACTTATTGTCTATTGGCTAGAGCTGCAATCAACGAAGGAAATTCACAGTGGGGACGAAAACCAGAATCGACGTCAAAAGCAAACAACTCGTCACTGTTACCATCTGATTTGTGTCGGTGCTTTTCAATAAGGGAGATCAAAGCAGCCACTAATGATTTTGATGATAGTTTAGTTATTGGTGTTGGAGGGTTTGGCAATGTCTATAAAGGCCAAATTGAGAACGGTTCAATTCCTGTGGCAATCAAACGGCTCAAACAAGGTTCACAACAAGGCCTCAAAGAGTTTGAAACTGAGATTGAAATGCTCTCTCAACTTCGTCACCATCATTTGGTATCTCTCATTGGTTTCTGCAACGATGACAACGAGATGATCCTCGTCTACGAGTTCATGGCTCATGGAACCTTTCGTGAGCATCTTTATGATTCTGAGAACCAACCACTTTCATGGAATCAAAGGCTGGAGATTTGCCTAGGTGCTGCACGGGGACTGCATTACCTACATACAGGGGCAAAGCATGCAATCATTCATCGAGACGTCAAGTCAACAAACATCTTGATAGATCAAAACTGGACGGCTAAGATTTCGGATTTCGGACTATCCAAAGTAGGACCAGCGGGTATTTCGAGATCTAACATTAACATAAGCACATTAGTGAAAGGAAGCATTGGATATTTGGATCCAGAATACTACACAGTTCAAATATTGACGGATAAGTCAGACGTGTACTCATTCGGAGTTGTGTTGCTTGAGGTATTATGCGGGAGGGCTCCTATTCTCCGCGCGGTGGAGAGGGAGCGGCAAAACCTTGTAGAGTGGTTTCGAAGAAGTTTTGATGAGAATGAGATTTATGAGACGGTTGATCCAACCTTGAGGGAAAGCATGACGCCAGAATGCTTAATGGCATACACTGATATTGCATTGAAATGCTTAGCAAATAAGGGGAATGATCGGCCATCCATGGGTGATGTAATGTTGGGCCTCGAGTCTCTGATGGAGACGATGAACAATGCAGAGAGGACAAAGCTTGGTGTGATGACCATAAATGAGGAGATTATTGTTGAAGAAGGATCAGGATTCAACAGGTGA 2550 0.4373 MGSLNQNVVSSMTKQPAMTMFFLLLFLILFCICVTSYTPVDNFLVNCGTSGNSPSLDGRRNWTGDKDSTLFSPIEFSNSNNSSVSAAALGEIIPYDTARLSRSEFSYLFPLKTNGQKFIRLYFYPSSYDDLNFLRSDSFFSVRVGSHTLLKDFNASIIADDDAGVETILREYCVNICDPSEGLSITFTPNPSHPNAYAFVNGIEVVSMPTFLYYTKPDDLQSMLLIDGTQQYPVKNNRALETVYRTNVGGSQIPNEHDTGMFRYWDQDIAYLEKEHPRSVSAGFALKPIYKNYPNYTAPDEVYMTARNYGMNQTSNFNVTWEFEVDSNFTYMVRLHFCEFDEAIQQAGERVFQIFINDVLVEPLADVMLWTQILVPVHRDYAVSMPRHGSLKKLNLSIKLQPHPTARSIYRDVLLNGIEIFKISDFRNNLGGSNPDQRPSPSVLLPKVSNNSVLLPKVPNKNPPKMRVISIVVGSASGFILLSLIILLTYCLLARAAINEGNSQWGRKPESTSKANNSSLLPSDLCRCFSIREIKAATNDFDDSLVIGVGGFGNVYKGQIENGSIPVAIKRLKQGSQQGLKEFETEIEMLSQLRHHHLVSLIGFCNDDNEMILVYEFMAHGTFREHLYDSENQPLSWNQRLEICLGAARGLHYLHTGAKHAIIHRDVKSTNILIDQNWTAKISDFGLSKVGPAGISRSNINISTLVKGSIGYLDPEYYTVQILTDKSDVYSFGVVLLEVLCGRAPILRAVERERQNLVEWFRRSFDENEIYETVDPTLRESMTPECLMAYTDIALKCLANKGNDRPSMGDVMLGLESLMETMNNAERTKLGVMTINEEIIVEEGSGFNR 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1988 849 CDD STKc_IRAK 547 811 - -
Lele08g1988 849 Pfam Protein tyrosine and serine/threonine kinase 546 812 IPR001245 GO:0004672|GO:0006468
Lele08g1988 849 Gene3D - 238 424 - -
Lele08g1988 849 Gene3D - 42 209 - -
Lele08g1988 849 ProSitePatterns Protein kinases ATP-binding region signature. 547 570 IPR017441 GO:0005524
Lele08g1988 849 FunFam FERONIA receptor-like kinase 42 209 - -
Lele08g1988 849 FunFam Receptor-like protein kinase FERONIA 512 617 - -
Lele08g1988 849 Gene3D Transferase(Phosphotransferase) domain 1 618 839 - -
Lele08g1988 849 FunFam FERONIA receptor-like kinase 238 424 - -
Lele08g1988 849 Gene3D Phosphorylase Kinase; domain 1 502 617 - -
Lele08g1988 849 FunFam Receptor-like protein kinase FERONIA 618 836 - -
Lele08g1988 849 ProSiteProfiles Protein kinase domain profile. 541 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1988 849 SMART serkin_6 541 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1988 849 PANTHER OS03G0124300 PROTEIN-RELATED 19 497 - -
Lele08g1988 849 Pfam Malectin-like domain 45 423 IPR024788 -
Lele08g1988 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 662 674 IPR008271 GO:0004672|GO:0006468
Lele08g1988 849 SUPERFAMILY Protein kinase-like (PK-like) 526 813 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1988 Lele-ChrLele08 14688285 14690834 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1988 32 832 Receptor kinase-like Gene Family AT3G51550 43.697 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele08g1988 Malectin_like 4.6e-38 CL0202