Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1984 ATGACCACGCAACCATCAATGACCATGTTTTTCCTCTTACTCTTCCTAATCCTTTTCTGTATCTGCACAACCTCCTACACTCCTGTTGATAACTTCTTAGTCAACTGCGGTACCTCCGGCAATTCTCCTTCTTTAGATGGCCGCCGGAACTGGACCGGAGACAAAGACTCCACACGATTCTCTCCGATCGAATTTTCCAACAGCAACAACACCTCAGTAAGCGCCGCTGCACTTGGTGAAACAATCCCTTACGACACCGCACGCCTCTCTCGTTCACAATTCTCCTATTTGTTTCCTTTGAAGACCAACGGCCAAAAGTTTATTCGCCTTTATTTTTACCCATCTTCCTACGATGGCCTCAACTTCCTCCGCTCCGACTCTTTCTTCTCCGTCAGAGTAGGGTCTCACAGTCTTTTGAAAGACTTCAATGCTTCAATCATCGCCGATGACGACGCCGGCGAAGAAACCTTTTCACGAGAGTACTGCATCAACATTTGTGACCCTAATGAAGGGCTTAGCATAACCTTCACGCCCAACCCATCTCATCCAAACGCCTATGCTTTCGTCAATGGCATCGAAGATATTGCCTACTTGGAGAGCAGGGAGCGACCATATAGCGTATCAGCAGGTTTTGTTTTAAAGCCAATCTACAGAGATGATCAAAATTATTTTGCACCTGATGCAGTATACATGACTGCCAGGAACTATGGAATTAAAGAAACATCCAAATTTAATGTGACTTGGAAATTTGAAGTTGACTCAGTTTTTTTATATGGGGACTATGCCGTGTCGATGCCGAGACATGGAAGCTTGAAGAAGCAGAATCTTTCAATTAAGTTGCAACCACACCCAACCGCAAGAAGCATTTACAGAGATGTTTTATTGAATGGTATTGAAATTCTGAAAATAAGTGACTTCAGAAACAATCTCGGAGGTTCTAATCCCGATCAACGTCCTTCTCCCTCAGTACTGTTTCCGAAGGTATCTAACAAGAATCCACCAAAAATGAGAGTAATTTCCGTAGTTGTGGGGTCAGCTTCCGGCTTCATTCTGCTATCTCTCATCATTTTGCTGACTTATTGTCGATTGGCTAGAGCTGCAATCAACGAAGGAAATTCACAGTGGGGACTAACACCAGAATCGACGTCAAAAGCAAACAACTCGTCACTGTTACCATCTGATTTGTGTCGGTGCTTTTCAATAAGGGAGATCAAAGCAGCCACTAATGATTTTGATGATAGTTTAATTATTGGTGTTGGAGGGTTTGGCAATGTCTATAAAGGCCAAATTGAGAACGGTTCAATTCCTGTGAGAATCAAACGGCTCAAACAAGGTCACAACAAGGCCTCAGAGAGTTTGAAACTGAGATTGAAATGCTCTCTCAACTTCGTCACCATCATTTGGCTGGAGATTTGCCTAGGTGCTGCACGGGGACTGCATTACCTACATACAGGGGCAAAGAATGCAATCATTCATCGAGACGTCAAGTCAACAAACATCTTGATAGATCAACACTGGACGGCCAAGCTTTCGGATTTCGGACTATCCAAAGTAGGACCAGCGGGTATTTCGAGATCTAACATTAACATAAGCACATTAGTGAAAGGAAGCATTGGATATTTGGATCCAGAATACTACACAGTTCAAATATTGACAGATAAGTCAGACGTGTACTCATTCGGAGTTGTGTTGCTAGAGGTATTATGTGGGAGGGCTCCTATTCTCCGCGGGGTGGAGAGTGATCGGCAAAACCTTGTAGAGTGGTTTCAAAGAAGTTTTGATGAGAATGAGATTTATGAGACGGTTGATCACCATGGGGGAAAGCATGACGCCAGAATGCTTAATCGCATACACTGA 1857 0.4367 MTTQPSMTMFFLLLFLILFCICTTSYTPVDNFLVNCGTSGNSPSLDGRRNWTGDKDSTRFSPIEFSNSNNTSVSAAALGETIPYDTARLSRSQFSYLFPLKTNGQKFIRLYFYPSSYDGLNFLRSDSFFSVRVGSHSLLKDFNASIIADDDAGEETFSREYCINICDPNEGLSITFTPNPSHPNAYAFVNGIEDIAYLESRERPYSVSAGFVLKPIYRDDQNYFAPDAVYMTARNYGIKETSKFNVTWKFEVDSVFLYGDYAVSMPRHGSLKKQNLSIKLQPHPTARSIYRDVLLNGIEILKISDFRNNLGGSNPDQRPSPSVLFPKVSNKNPPKMRVISVVVGSASGFILLSLIILLTYCRLARAAINEGNSQWGLTPESTSKANNSSLLPSDLCRCFSIREIKAATNDFDDSLIIGVGGFGNVYKGQIENGSIPVRIKRLKQGHNKASESLKLRLKCSLNFVTIIWLEICLGAARGLHYLHTGAKNAIIHRDVKSTNILIDQHWTAKLSDFGLSKVGPAGISRSNINISTLVKGSIGYLDPEYYTVQILTDKSDVYSFGVVLLEVLCGRAPILRGVESDRQNLVEWFQRSFDENEIYETVDHHGGKHDARMLNRIH 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1984 618 SUPERFAMILY Protein kinase-like (PK-like) 387 588 IPR011009 -
Lele08g1984 618 ProSiteProfiles Protein kinase domain profile. 336 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1984 618 Pfam Malectin domain 34 161 IPR021720 -
Lele08g1984 618 Gene3D Transferase(Phosphotransferase) domain 1 459 616 - -
Lele08g1984 618 PANTHER OS03G0124300 PROTEIN-RELATED 257 372 - -
Lele08g1984 618 FunFam FERONIA receptor-like kinase 31 197 - -
Lele08g1984 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 490 502 IPR008271 GO:0004672|GO:0006468
Lele08g1984 618 SMART serkin_6 411 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1984 618 Pfam Protein kinase domain 471 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1984 618 Gene3D - 31 199 - -
Lele08g1984 618 Gene3D Phosphorylase Kinase; domain 1 382 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1984 Lele-ChrLele08 14645247 14647555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1984 7 603 Receptor kinase-like Gene Family AT5G39000 32.944 1.04e-110 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele08g1984 Pkinase 4.4e-21 CL0016