Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1977 ATGATGAACTGGAGACAGAAGGTTGTCTCCAATATGATCAAACCGCCAATAATAGCCGTATCCTTTGTCTTTTTCCTTTGCTTTCAAATGTTTTTCACCATCCCCGTTACCTCCTACACTCCTGTTGATGATTTCGCAGTACTCTGCGGTGACTCCGGCAATCCTCCGTCACTAGTTCACCGGAACTGGACCGGAGACAACGGCTTCACAGCATTCTCTCTTATAGATCACCACAAAGGCACCCTCTCAGTCAAACCCGAGAAACCAATGAGCAAAATCCCCTACACAACTGCACGCGTATCTCGCTCTGAATTCTCCTACTCATTTCCAGTGAAGACTGCCGGCCAAAAGTTCATTCGCCTCTACTTTTACCCATCTTCCTACAACCCCAACAACTTCCTTCGCTCCGATGCTTTCTTCTCCGTCAAAGCATGGCCCCACACCCTTCTTAAGGACTTCAACGCTTCACTTAACGTTGCTGAGCCAGAAGGAGCCATCGTACGAGAGTACTGCGTCAACGTTGACCCCGGTCAGAGGCTTACCATAACCTTCACGCCGAACCCATCTCATCCAAATGCGTATGCTTTTGTAAATGGGATTGAAGTCGTCTCTATGCCCACCTTTCTTTACTACACGAAACCTGATGATCTTCAATCTATGCCGCTAAACGGCGAAAACCAGCAGTTTCCCGTGAAGAACAGCAATGCTCTGGAGACTCTGTACAGAACTAATGTTGGCGGAAGACAGATCCCTCCCGAAAATGATACTGGCATGTTTCGTTATTGGGACCAGGATATTGCCTACTTGGAGAAGGAGCGCCCGCATAGTGTATCCGCAGGTATTGGTTTAAAGCCAATCTACAAAAATTATCCAAATTATACTGCACCGGACGAAGTATACATGACAGCTCGAAACTATGGAATGAACCAGACGTCCAACATTAATGTGACTTGGGAGTTTGAAGTGGGCTCTAATTTTACTTACATGGTGAGACTTCACTTTTGTGAGTTTGAAGAAGCCATTCAACAAGCTGGAGAAAGAGTTTTTCAAATCTTTATAGCTGATAATCTGGTGGAGTCTAAAGCCGACGTGTTCAAGTGGAGTAGTGGCATCTTGATTCCTATGCATAAAGACTACGCGGTATCCATGTGGAACCAAGGGGGAAGCCAGAAGAAGATGGATCTTTCTATTAAGTTGCAACCAGACCCAATGAGCGCTTACAAAGATGTGTTATTGAATGGTATTGAAATTCTCAAAATCAGCGACAACGATGACAACCTCGGAGGAGCCAATCCTGATCCGCGTCCATCTTCCGTGCCATTCATGCTACCATCGAAGAAGTCATCTAAGAAGGCAAAGAAAATCATAATCTTTGCCGTCGTTGGGTCATGTGCAGGCTTCATTGTGCTGTCTCTTATTGTTCTGTTGATTTTCCGGTGGATGATTAGAGCTCCGGTCAAGGAAGGAAGTTCATGCTGGGGACAAAAATCAGCGGACTCGTCCAAGAAAAACAAACCCGACGGGTCAACATTGCCGTCCAATTTGTGTCGCTACTTTTCTATAGATGAAATAAGAGCAGCCACCAATAATTTCGATGATATTTTCATTGTGGGCGTTGGAGGGTTTGGAAATGTCTATAGAGGCTACATTGATAACACTACAGTTCCTGTAGCAATCAAACGGCTCAAGCAAGGTTCACAACAAGGTCTCAAAGAGTTCGAAACTGAGATTGAAATGCTCTCTCAACTTCGTCACCGTCATTTAGTATCTCTCATCGGTTACTGCAACGACGGCAACGAGATGATCCTCGTCTACGAGTTCATGTCCCGTGGGACCCTCCGTGAACATATTTACGATTCTGATAACCCTAAACTTTCATGGAAGCAAAGGTTGGAGATGTGCCTTGGAGCAGCGTGTGGACTGCATTATCTTCATACGAGTGCCAACCGCAAAATAATTCACCGTGACGTGAAACCCACGAATATCCTAATAGATGAGAAATGGGTGGCTAAGGTTTCGGATTTTGGATTATCCAAAATGGGACCCACAGGGATGTCAAAGTCTCACATAAGTACAATGGTAAAAGGAAGCTTTGGTTACTTGGATCCAGAGTACTATAAACGTCAAAGGTTGACTGAGAAATCTGACGTTTATTCCTTTGGAGTTGTGTTGCTTGAAGTATTGTGTGGGAGGCCTCCTTTGATACGTAACGTGGAGAAGCAGAAATCAAGTTTAGTGGAATGGGTTCGAAAATGCCATCGCGAAGGTGTGATTCATCAAACGGTGGATCCATTTCTGATAGAAAGTATAACACCAGAGTGCTTAAAAGCATTCAGCGACATGGCACTGAAATGTTTGGTGGAAGATGGGAATGAACGACCTTCCATGAACGACGTCGTGTGGGTTCTAGAGTTTGCGTTGCAGCTTCAAGAAAGTGCAGAGAAAGTGGGGCTTGATGTGCTGGAAAGTGAAGGAAAGAGAGAGGAAAGGGCTCTGCTGAGAAAAGCGACAAATAATAATGTGGAAGAAAGCAAAGTAGGGTTCACAAGCAGTGATGAATCAAAAGGAAGTAGGTTGACTAGTTCAAGCAGTGAAGATCAGTCTTAG 2607 0.4484 MMNWRQKVVSNMIKPPIIAVSFVFFLCFQMFFTIPVTSYTPVDDFAVLCGDSGNPPSLVHRNWTGDNGFTAFSLIDHHKGTLSVKPEKPMSKIPYTTARVSRSEFSYSFPVKTAGQKFIRLYFYPSSYNPNNFLRSDAFFSVKAWPHTLLKDFNASLNVAEPEGAIVREYCVNVDPGQRLTITFTPNPSHPNAYAFVNGIEVVSMPTFLYYTKPDDLQSMPLNGENQQFPVKNSNALETLYRTNVGGRQIPPENDTGMFRYWDQDIAYLEKERPHSVSAGIGLKPIYKNYPNYTAPDEVYMTARNYGMNQTSNINVTWEFEVGSNFTYMVRLHFCEFEEAIQQAGERVFQIFIADNLVESKADVFKWSSGILIPMHKDYAVSMWNQGGSQKKMDLSIKLQPDPMSAYKDVLLNGIEILKISDNDDNLGGANPDPRPSSVPFMLPSKKSSKKAKKIIIFAVVGSCAGFIVLSLIVLLIFRWMIRAPVKEGSSCWGQKSADSSKKNKPDGSTLPSNLCRYFSIDEIRAATNNFDDIFIVGVGGFGNVYRGYIDNTTVPVAIKRLKQGSQQGLKEFETEIEMLSQLRHRHLVSLIGYCNDGNEMILVYEFMSRGTLREHIYDSDNPKLSWKQRLEMCLGAACGLHYLHTSANRKIIHRDVKPTNILIDEKWVAKVSDFGLSKMGPTGMSKSHISTMVKGSFGYLDPEYYKRQRLTEKSDVYSFGVVLLEVLCGRPPLIRNVEKQKSSLVEWVRKCHREGVIHQTVDPFLIESITPECLKAFSDMALKCLVEDGNERPSMNDVVWVLEFALQLQESAEKVGLDVLESEGKREERALLRKATNNNVEESKVGFTSSDESKGSRLTSSSSEDQS 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1977 868 CDD STKc_IRAK 537 804 - -
Lele08g1977 868 FunFam Receptor-like protein kinase FERONIA 503 607 - -
Lele08g1977 868 Pfam Malectin-like domain 60 419 IPR024788 -
Lele08g1977 868 ProSiteProfiles Protein kinase domain profile. 531 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1977 868 FunFam Receptor-like protein kinase FERONIA 608 824 - -
Lele08g1977 868 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Lele08g1977 868 MobiDBLite consensus disorder prediction 493 509 - -
Lele08g1977 868 Gene3D Transferase(Phosphotransferase) domain 1 608 823 - -
Lele08g1977 868 PANTHER OS03G0124300 PROTEIN-RELATED 21 491 - -
Lele08g1977 868 Gene3D - 235 421 - -
Lele08g1977 868 Gene3D - 45 206 - -
Lele08g1977 868 SMART serkin_6 531 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1977 868 MobiDBLite consensus disorder prediction 843 868 - -
Lele08g1977 868 SUPERFAMILY Protein kinase-like (PK-like) 507 806 IPR011009 -
Lele08g1977 868 MobiDBLite consensus disorder prediction 426 445 - -
Lele08g1977 868 MobiDBLite consensus disorder prediction 490 509 - -
Lele08g1977 868 Gene3D Phosphorylase Kinase; domain 1 516 607 - -
Lele08g1977 868 FunFam FERONIA receptor-like kinase 44 206 - -
Lele08g1977 868 ProSitePatterns Protein kinases ATP-binding region signature. 537 560 IPR017441 GO:0005524
Lele08g1977 868 FunFam FERONIA receptor-like kinase 235 421 - -
Lele08g1977 868 Pfam Protein tyrosine and serine/threonine kinase 537 800 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1977 Lele-ChrLele08 14505051 14507657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1977 34 820 Receptor kinase-like Gene Family AT3G51550 47.868 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele08g1977 Malectin_like 7.4e-40 CL0202