Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1955 ATGAACCCAGAGTTCAAAGTTGGAAGATTACAGAGGAGTTGGAAGCCACCCTCCTCATTATTTCTCCTCGGGCCGAAACCAGCATCTATGAAGGTTCTTGAAGTTGGCCCGGTGGCACCGCCGCCAGAAACAACCACGTCCACCGGCGCGTCGGAATTCTCTCTACCGCTCACGTTTTTCGACGTACTGTGGTTGAGATTCCCGCCGGTGGAGCGTCTTTTCTTCTGCGAATTCCCAAACCCACCTTCCTCCTTCTTCCATTCCCTTCTTCCAAAACTTAAACACTCCCTCTCTCTCACTCTCCACCACTTTCTTCCTCTCGCTGGCAACATCGTATGGCCACCTCACTCCCCAATACCCTTCATCCGTTACGTCGCCGGCGACGGCGTCTCCCTCACCATTGCTGAATCCGACGCCGATTTCAACCATCTTTCTGGTTCCGACTTACCTGAAGCCGAGGAAATCCGCCAGTTGGTACCCCACTTGACCGTTTCTGATGAGAAAGCTCCTCTCATGAGTCTGCAAATCACTCTGTTTCCGAACTCTGGGTTCTCTCTTGGAATCGCCACCCACCACGCAACCATGGACGGAAAATCATCAACTTTGTTTCTAAAATCATGGGCTTATCTCTGCTCCAATCTCCAAGAATCATCATCACTGTCATCATCGGTTTCATCGTTACCGGAGAATCTAATACCATCCTTTGACAGATCAGTAATCATAGATCCGTCTGCTATTGCTGAGAAATTCGCGAATTTTTACTTAAAGCAAGGTGGACCAAACAACAGAAGCTTGATGTTATGGGACATGAACAAGCCAGATCAAGGAAAGCTCATAAGGGGAACATGGGAATTACTTCCTTCGAGTATTCAAAAGCTTAAGAAATCTGCAGAAACAAAGCTGAAGAAGAAGGTTCATCTATCAACCTTCTCAGTAACATGTGCCTATATGATAAACTGCTTGGTCAAATCAGAACAAACAAAACAGGAGAAAGTGTTGTTCATATTCAGTGCGGATTGTAGGTCCCGTTTGGATCCTCCGATTCCATCTTCATATTTTGGAAACTGCATTGGCGGGGTTAAGGTTGAGGATGAAACGAAGAACTTGTTAGAAGATGATGGGTTTATCGTTGCTCTTGAAGCCATAAGTGAAGCTTTGAAGAGATTTCAAGATGAAGAGATATTAAGTGCAGCAGAAACATGGATTTCTGATATGGAAACTTTTGGATTGACTGATACTTACAGAATGTTTTCAATTGCAGGATCACCAAGATTTGATGTTTATGGTAATGATTTTGGATGTGGAAGGCCAAAGAAGGTGGAGCTAGTTTCTATAGATAAGACTGGAGCCTTTTCTCTTGCAGAAAGTAGGGATGGTAATGGAGGTATTGAGATTGGGTTGGTGTTGAACGAAACTCAAATGGAAGCTTTTTCTGCTGTTTTTCTCAAAGGTCTTTCTTCTTCCTGA 1467 0.4472 MNPEFKVGRLQRSWKPPSSLFLLGPKPASMKVLEVGPVAPPPETTTSTGASEFSLPLTFFDVLWLRFPPVERLFFCEFPNPPSSFFHSLLPKLKHSLSLTLHHFLPLAGNIVWPPHSPIPFIRYVAGDGVSLTIAESDADFNHLSGSDLPEAEEIRQLVPHLTVSDEKAPLMSLQITLFPNSGFSLGIATHHATMDGKSSTLFLKSWAYLCSNLQESSSLSSSVSSLPENLIPSFDRSVIIDPSAIAEKFANFYLKQGGPNNRSLMLWDMNKPDQGKLIRGTWELLPSSIQKLKKSAETKLKKKVHLSTFSVTCAYMINCLVKSEQTKQEKVLFIFSADCRSRLDPPIPSSYFGNCIGGVKVEDETKNLLEDDGFIVALEAISEALKRFQDEEILSAAETWISDMETFGLTDTYRMFSIAGSPRFDVYGNDFGCGRPKKVELVSIDKTGAFSLAESRDGNGGIEIGLVLNETQMEAFSAVFLKGLSSS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1955 488 Gene3D - 27 258 IPR023213 -
Lele08g1955 488 SUPERFAMILY CoA-dependent acyltransferases 303 445 - -
Lele08g1955 488 SUPERFAMILY CoA-dependent acyltransferases 125 220 - -
Lele08g1955 488 Pfam Transferase family 53 478 - -
Lele08g1955 488 Gene3D - 276 487 IPR023213 -
Lele08g1955 488 PANTHER - 30 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1955 Lele-ChrLele08 14172728 14174794 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1955 79 477 Monolignol Biosynthesis Gene Families AT5G48930 25.120 2.66e-16 79.0