Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1944 ATGGCTCCGAAACAGCCGAGTACGGGTTTATTCGTTGGATTGAACAAGGGTCACGTTGTGACCAAGAAGGAATTGGCTCCACGCCCGTCAGATCGCAAAGGGAAAACCAGCAAGAGGGTACACTTTGTAAGGAGTCTTATCCGTGAAGTTGCTGGCTTTGCTCCATATGAGAAGAGGATTACAGAGCTTTTGAAGGTTGGTAAGGATAAGAGAGCATTGAAAGTTGCCAAGAGAAGGTTGGGTACCCACAAGAGAGCAAAGAAGAAGCGTGAGGAGATGTCGAACGTGCTCCGAAAGATGAGGTTGGGCTATGTTCTCGTCTTGATGGCTGGTGGAGCTGGTGACAAAAAGAAGTAA 357 0.479 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRRLGTHKRAKKKREEMSNVLRKMRLGYVLVLMAGGAGDKKK 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1944 118 PANTHER 60S RIBOSOMAL PROTEIN L36 1 109 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lele08g1944 118 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lele08g1944 118 Gene3D 60S ribosomal protein L36 1 103 IPR038097 -
Lele08g1944 118 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lele08g1944 118 FunFam 60S ribosomal protein L36 1 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1944 Lele-ChrLele08 14010489 14011627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1944 1 118 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 76.271 5.51e-56 168