Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1920 ATGGGGTTTGATGGTTTAATTAGGAGCAATAGTAGAAACTACAGCTGTGGGAGTGCAAGAGTTGTGGCTGATATTTCTCCACACAATCTCTATATCCCTAGTGGTTCCATTGTTGAGCAACCTCTTCATTCTCCACCTATTTTAACTCAGCATAAAATGGAGGGCCATGGTGGTGATATGGGTCTTATTGGGGAATTTGATCATAGTTTTATGGGTAGGATGAGGGATGATGAATATGAGAGTCGGTCCGGGAGCGATAATTTCGAAGGAGTTTCCGGCGATGATCACGACGCCGCCGGTGACGATCAGCCTCGGGCAGGAAGAAGAAAGAAATATCACAGACATACTCCTCATCAAATTCAAGAGCTCGAATCATTTTTCAAGGAGTGTCCTCATCCTGATGAGAAACAGAGGATGGAACTTAGTAAGAGGCTGGGCTTGGAGAATAAACAGATCAAGTTCTGGTTTCAAAATAGAAGAACTCAAATGAAGACTCAATTGGAACGGCATGAGAATATAATTCTGAGACAAGAGAATGACAAACTCCATGCTGAGAATAGTATGATAAAGGAAGCCATGGCCAACCCGATGTGTAACAGATGTGGTGGCCCGGCTATTCCTGGTCAAATTTCATTTGAGGACCACCATCTCAGAATTGAAAATGCTCGGCTTAAGGATGAGTTGAACCGGATATGTTCCTTGGCAAACAAGTTCCTCGGTAGGCCACTCTCGTCATTGGCCTGCCCCACCTCTGTTATGGGTTCGAATTCTGGTCTTGAACTTGCTATAGGAAGGAGTGAAATTGGCGGCTCGAGTGCTCTAGGTTCTTCCCTGCCAATGGGGCTTGACTTAGGGGAAGATATTATGGGCGCACATTCGGCAATGCCTCGAATTAGATCACCGATGGGAATGATGGGAGGTGAAATTCAGGTTGATAGGTCTATGCTCATCAATCTCGCGCTGTCTGCTATGGAGGAATTAATGAAGATGGCTCAGGCTGATAGCCCTCTCTGGATTAAGTGTTTGGGTGGTGAGAAAGAGATTCTGGACCATGAGGAGTATGACAGGATAATTTCTCCTTGTATCAGCCCAAAACCGGCCGGTTTTGTAACCGAAGCTACAAGGGAAACCGGGATAGTCATCATAAACAGCCTAGCCCTCATGGAGACATTGATGGACGCAAACCGGTGGGCAGAGATGTTTCCCTCGTTGATAGCTAGAGCTGCGACTGTTGAAGTAATATCGAATGGTATGGGTGGAACCAGAAATGGTGCTTTGCAAGTGATGCATGCTGAGATTCAACTGCTTTCGCCGCTCGTCTCCGTGCGTCAATTGAGACTTCTCCGGTTTTGCAAGCAGCATACAGAAGGAGTGTGGGCTGTAGTCGATGTTTCAGTCGAAATTGGCCATAGTTCGATCGATGGCCACCCATTCGTGAGCTGTAGTAGGCTTCCTTCAGGCTGTGTTGTGCAAGACATGCCCAATGGTTACTCTAAGGTTACATGGGTTGAGCATACACAATATGATGAAAGTGGTGTTCACCAACTGTACCGGCCGTTGGTGAATTCTGGCTTTGGCTTTGGCGCTCATCGGTGGATTGCCACCCTTCAAAGGCAATGTGAATGCTTGGCAATCCTCATGTCCTCTTCTATACCCAGTGAGGATCATACAGCATTAAGCCAAGCTGGTAGGAGAAGCTTGTTGAAGCTGGCGCAGCGCATGACGAATAATTTCTGTTCTGGGGTTTGTTTATCGTCCGCACGCAAGTGGGACAGCCTTCACATTGGCACTCTTGGTGATGATGTGAAAGTGATGACCCGGAAGAACGTGGATGACCCTGGTGAACCTCCTGGGATCGTGCTGAGTGCCGCGACTTCTGTTTGGGTTCCGGTGTCCCAGGAGAATCTGTTCAATTTCGTGCGTGACGAACGGTTGAGAAGCGAGTGGGACATTTTGTCGAATGGGGGACCGATGCAGGAGATGGTTCATATTGCAAAAGGTCAAGGTTCAGGGAATTGTGTGTCTCTACTTCGTGCCAGCGCTGTGAATCCCAAGGAGAGCAACATGGTCATTCTGCAAGAGACATGGACCGACCCGTCGTGCTCGGTGGTGGTGTACGCGCCGGTCGACGTGCAATCCTTGAACGTTGTAATGAGTGGCGGAGACTCCGCCTATGTGGCTCTCTTGCCTTCAGGTTTCGCCATTCTCCCGGACGGCCGCCAATCCAGCTTCGGTGGCGGCGGTCTACTCAAAGGTGGCAGCCCCGATGTTGACCACCAAGGAAGCCTCCTCACGGTCGGGTTCCAGATTCTTGTAAACAGTCTGCCAACGGCGAAACTCACGGTGGAGTCGGTCGAGACGGTGAACAACCTCATCTCGTGCACCATTCAGAAGATCAAAAGCGCCCTGGGAGTTGCATGA 2421 0.4911 MGFDGLIRSNSRNYSCGSARVVADISPHNLYIPSGSIVEQPLHSPPILTQHKMEGHGGDMGLIGEFDHSFMGRMRDDEYESRSGSDNFEGVSGDDHDAAGDDQPRAGRRKKYHRHTPHQIQELESFFKECPHPDEKQRMELSKRLGLENKQIKFWFQNRRTQMKTQLERHENIILRQENDKLHAENSMIKEAMANPMCNRCGGPAIPGQISFEDHHLRIENARLKDELNRICSLANKFLGRPLSSLACPTSVMGSNSGLELAIGRSEIGGSSALGSSLPMGLDLGEDIMGAHSAMPRIRSPMGMMGGEIQVDRSMLINLALSAMEELMKMAQADSPLWIKCLGGEKEILDHEEYDRIISPCISPKPAGFVTEATRETGIVIINSLALMETLMDANRWAEMFPSLIARAATVEVISNGMGGTRNGALQVMHAEIQLLSPLVSVRQLRLLRFCKQHTEGVWAVVDVSVEIGHSSIDGHPFVSCSRLPSGCVVQDMPNGYSKVTWVEHTQYDESGVHQLYRPLVNSGFGFGAHRWIATLQRQCECLAILMSSSIPSEDHTALSQAGRRSLLKLAQRMTNNFCSGVCLSSARKWDSLHIGTLGDDVKVMTRKNVDDPGEPPGIVLSAATSVWVPVSQENLFNFVRDERLRSEWDILSNGGPMQEMVHIAKGQGSGNCVSLLRASAVNPKESNMVILQETWTDPSCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILPDGRQSSFGGGGLLKGGSPDVDHQGSLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQKIKSALGVA 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1920 806 SUPERFAMILY Bet v1-like 311 542 - -
Lele08g1920 806 CDD homeodomain 109 166 IPR001356 GO:0003677
Lele08g1920 806 FunFam Homeobox-leucine zipper protein GLABRA 2 318 541 - -
Lele08g1920 806 Gene3D - 95 180 - -
Lele08g1920 806 ProSitePatterns 'Homeobox' domain signature. 141 164 IPR017970 GO:0000981|GO:0006355
Lele08g1920 806 ProSiteProfiles START domain profile. 309 545 IPR002913 GO:0008289
Lele08g1920 806 SUPERFAMILY Homeodomain-like 93 166 IPR009057 -
Lele08g1920 806 CDD START_ArGLABRA2_like 313 541 - -
Lele08g1920 806 SMART START_1 318 542 IPR002913 GO:0008289
Lele08g1920 806 ProSiteProfiles 'Homeobox' domain profile. 106 166 IPR001356 GO:0003677
Lele08g1920 806 Pfam Homeodomain 109 164 IPR001356 GO:0003677
Lele08g1920 806 FunFam Homeobox-leucine zipper protein HDG1 93 182 - -
Lele08g1920 806 SMART HOX_1 108 170 IPR001356 GO:0003677
Lele08g1920 806 SUPERFAMILY Bet v1-like 570 800 - -
Lele08g1920 806 MobiDBLite consensus disorder prediction 77 114 - -
Lele08g1920 806 Pfam START domain 319 542 IPR002913 GO:0008289
Lele08g1920 806 Coils Coil 160 195 - -
Lele08g1920 806 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 106 803 IPR042160 -
Lele08g1920 806 MobiDBLite consensus disorder prediction 77 107 - -
Lele08g1920 806 Gene3D - 318 541 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1920 Lele-ChrLele08 13650977 13656061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1920 1 803 Homeobox Transcription Factor Family AT3G61150 55.690 0.0 885
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele08g1920 START 1.3e-46 CL0209