Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1879 ATGAACTCCCAAAGAAATGCCCTCGAATTGCTTCTGTTGTTTCCTTCCACAAGAAGATCAACACCAACAAGTCAAAACAAGGCATGTTTACTTTGTATCTCTGATGACAGCAAAAATAGGGATTATCCATGGGAAATGTACACGTTGAAGGAGTTGCTTCGTGCAACGAACAATTTCCATCAAGATAACAAGATCGGAGAGGGTGGCTTTGGAAGTGTTTATTGGGGTCGAACAAGTAAAGGCATCGAGATTGCAGTGAAGCGACTGAAGACGATGACTGCCAAGGCAGAGATGGAATTTGCAGTTGAAGTAGAAGTACTTGGAAGGGTGAGGCATAAGAACCTGTTAGGTCTAAGAGGATTCTATGCAGGAGGAGAAGAAAGACTTATTGTTTATGATTACATGCCCAATCATAGCTTGCTCACTCATCTTCATGGCCAGCTCGCTCCAAGTTGTCAGCTCGATTGGCCTAAAAGAATAAGCATCGCCATTGGAGCAGCTGAAGGGTTAGCGTATCTCCACCATGAGGCGAATCCTCACATTATACACAGAGACATAAAGGCGAGTAACGTTCTTTTGGACAGAGAGTTTCAAGTGAAAGTGGCAGATTTTGGTTTTGCAAAGCTAATACCAGAAGGAGTCAGCCATCTGACCACAAGGGTGAAAGGAACATTGGGATACCTGGCGCCAGAATACGCCATGTGGGGGAAGGTTTCAGAGAGCTGTGATGTTTATAGCTTTGGGATTTTACTTTTGGAGATCGTAAGCGCGAAGAAACCGATAGAGAAGCTACCAGGAGGAGTGAAAAGGGACATAGTTCAGTGGGTGACACCTTATGTTCAAAAGGGTATCTTCAATCATATTGCAGATCCAAAGTTGAAGGGCAAGTTTGACATGGAGCAGTTGAAATCCGTGGTGATGTTGGCCATGAAGTGCACCGATAGTTGCCCGGAGAAGCGGCCGAGTATGGCGGAGGTGGTGGATTGGGTCAAGGGAGGCGGTGGGCCGAGGAGAAAAGAGATTCCGGCAGCTCTGAGGGATGAAGAACACGACAAAAATGATAAGGACTATGAAGACATGGTGGGAAAGAGGCAATCATCCATGTTGAGAATACCAAGCGATAGACATAAAATAAGAAGATGA 1143 0.4532 MNSQRNALELLLLFPSTRRSTPTSQNKACLLCISDDSKNRDYPWEMYTLKELLRATNNFHQDNKIGEGGFGSVYWGRTSKGIEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGEERLIVYDYMPNHSLLTHLHGQLAPSCQLDWPKRISIAIGAAEGLAYLHHEANPHIIHRDIKASNVLLDREFQVKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIVSAKKPIEKLPGGVKRDIVQWVTPYVQKGIFNHIADPKLKGKFDMEQLKSVVMLAMKCTDSCPEKRPSMAEVVDWVKGGGGPRRKEIPAALRDEEHDKNDKDYEDMVGKRQSSMLRIPSDRHKIRR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1879 380 Pfam Protein kinase domain 59 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1879 380 ProSitePatterns Protein kinases ATP-binding region signature. 65 87 IPR017441 GO:0005524
Lele08g1879 380 FunFam PTI1-like tyrosine-protein kinase At3g15890 32 134 - -
Lele08g1879 380 SUPERFAMILY Protein kinase-like (PK-like) 40 346 IPR011009 -
Lele08g1879 380 Gene3D Phosphorylase Kinase; domain 1 27 134 - -
Lele08g1879 380 MobiDBLite consensus disorder prediction 337 380 - -
Lele08g1879 380 FunFam PTI1-like tyrosine-protein kinase At3g15890 135 344 - -
Lele08g1879 380 SMART serkin_6 59 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1879 380 PANTHER OS01G0253100 PROTEIN 28 331 IPR045271 -
Lele08g1879 380 ProSiteProfiles Protein kinase domain profile. 59 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1879 380 Gene3D Transferase(Phosphotransferase) domain 1 135 333 - -
Lele08g1879 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Lele08g1879 380 MobiDBLite consensus disorder prediction 337 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1879 Lele-ChrLele08 13162519 13164529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1879 33 332 Receptor kinase-like Gene Family AT5G45780 44.118 4.49e-82 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lele08g1879 Pkinase 9.6e-46 CL0016