Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1878 ATGTTTCCTTTACAACGAGGCAATGAGCTGTTGATTCAGTTCTCCAGGAGTCCCGATTCTCAGCTGCAACAAAGCAACAAGATCTCAGAAGATCCGATTTTGGATGATTATGGTTCTCCTCGTGTCAGCAATTCAGATAAAAAAATCGGTAACTGCTCATCAGGGAACAGCCTTTTTCAAGCTAGCAATCATAATAATCCTAACGAAAGCAAGAAGAAGAAGATGATTCATAGAGAGATTGAGAGACTAAGAAGGCAGGAAATGGCTTCCCTTTATGCTTCCCTCAGATCCCTTCTTCCTCTTGAGTACATCAAGGGAAAACGATCGATATCAGATCACATGAATGGGGCAGTGGGTTATATAAAGCACTTACAGAAGAATATTGAAGAACTTGGCGCTAAGAGAGATGAACTCAAGAAACCCTCATCAGATAATTCTTCTAACTTGGAAACCCTTGATGATGAGGGCCAACAGAAAAAATCGACAAGATTTACTGTTCATGAGAAAAATGGTGTTGTGGGAATCGAAATTATCAGTAACTTGAAAGATGAAAGGTTCTTACTCTCAAAGTTGCTGGAATTGCTGCTTGAACAAGGACTTGAAGTTGTTACTTATCTCTCTACCCAAGTCAATGGAAGAATACTTCATAGTGTTCACTGCGAGGTTAACAATTCCAATAGTGTAGATCTAGCTGAGCTGAGAAGGAAAATTGCAAGTTTCATTTCTTAG 729 0.3951 MFPLQRGNELLIQFSRSPDSQLQQSNKISEDPILDDYGSPRVSNSDKKIGNCSSGNSLFQASNHNNPNESKKKKMIHREIERLRRQEMASLYASLRSLLPLEYIKGKRSISDHMNGAVGYIKHLQKNIEELGAKRDELKKPSSDNSSNLETLDDEGQQKKSTRFTVHEKNGVVGIEIISNLKDERFLLSKLLELLLEQGLEVVTYLSTQVNGRILHSVHCEVNNSNSVDLAELRRKIASFIS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1878 242 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 62 239 IPR015660 -
Lele08g1878 242 MobiDBLite consensus disorder prediction 15 74 - -
Lele08g1878 242 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 72 124 IPR011598 GO:0046983
Lele08g1878 242 MobiDBLite consensus disorder prediction 15 30 - -
Lele08g1878 242 FunFam Transcription factor bHLH126 64 152 - -
Lele08g1878 242 Gene3D - 63 156 IPR036638 GO:0046983
Lele08g1878 242 CDD bHLH_AtORG2_like 73 148 - -
Lele08g1878 242 MobiDBLite consensus disorder prediction 44 66 - -
Lele08g1878 242 Pfam Helix-loop-helix DNA-binding domain 73 125 IPR011598 GO:0046983
Lele08g1878 242 SMART finulus 78 130 IPR011598 GO:0046983
Lele08g1878 242 MobiDBLite consensus disorder prediction 133 162 - -
Lele08g1878 242 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 143 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1878 Lele-ChrLele08 13146107 13147024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1878 77 238 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 44.379 8.73e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele08g1878 HLH 5.1e-10 No_clan