Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1877 ATGCACTCTCGGAAATTCCCCGTCTCGCCGTCGTCCCCGCTTGTTCCTGATCCACACCCCCCTGCGCTTTCTCCAAATCAGCCACACCCCTCTTACAAGAACCCCAAAAGCCACCATCTTTTGCCTCCACTTGTAGCTTCCGCCGCCTCTGTATGTTCCTTCTTCCTTCTCTTTTTCCTCTGTTTTCGCAGACTCGCGAGGAAACGCACCACCCCTTCTTCTGATTCTGAGTCTAAGCCTCCTTTTCGTTTCTCGTATTCCGTCCTCCGCCGTGCCACGTCATCCTTCTCCACCCGCCTTGGCCAAGGCGGCTTCGGCCCCGTCTACTCCGGCACTCTGCCTCCGACCCGACAACCCGTGGCCGTCAAGCTCATGGACTCTGCCTCTCTCCAGGGCGAGCGCGAGTTTCACAACGAACTCTTCTTCGCCTCCAGGCTTCACTCTCAGCGCGTGGTATCCGCCATCGGCTTTTGCTCTGACAGAAATCGCCGGAGGTTTTTACTTGTGTATGAGTTGATGCATAATGGTAACCTCCAAGACGCGCTCTTGCACCGCAAGTGCCCTGAGCTGTTGGATTGGAAGAAGCGGTTTTCCGTCATCCTCGACATAGCCAAAGGGATTCAGTATCTTCACTCTTGCGACCCACCCGTGATTCACGGTGACATCAAACCCAGTAATATTCTATTAGACCGTTCTCTATCGGGAAAAATTGGGGATTTCGGGCTTGCACGGTTGAAATCGGAGCCCCAGATTGAAATTGGGATTTTGGACTTAGACGGTAATGAAAAGAAGAACGGTGGATTGGAGTTAGAAGAAGAGAAGAAGGGAAAAGAAGAAGAATTAGAGAGTAATGGTGGGTCATTGCTTGAAGAAACACAGAGCGTGAATACCGTTGACGAAGGTAGCTTAGCCGCGGAGCAATCTCCAGAGGGTTTTGTCAGGATACCCATATCGGAGCCGTCCCCAGGGCCGTTGGAGGCGGCGCTGGTAGCGTCACCTTCGGAGGCGAATTTCGACAAAGTTAGCTTTGAGAGTGAGAAAAACATTTCCTTGAGTTATAAGAAAAATGGGAAAGTCATAAAGAGCAATTCCATGAAGGATTGGTGGTGGAAACAAGACATGGAAGAAGCAGCAGAATCCCGCATGGGTGAGAACAAGAAAGTGAAGGATTATGTAATGGAGTGGCTTGGAAAAGAAATAAACAAAGAAAGACCCAAGAGCGAATGGGTTGCAGCTACCTCTAGTAGTGGAGCAACAATGGAAAAAAGAGAGAAAAAGAAGAGCAAGAGGCGCTTGGAATGGTGGAGATCAATGGACGAGGAAACCATTAATCCTAAAGCTGTGAAGAAGAAGGAGAAGAGAAGACCAGCGAGAGAATGGTGGAAAGAGGAGTACTGTGAAGAGCTTGCGAAGAAGAAGAAGAAGAAGAAACAGCAGCAAAAGAGAAATGGAATAAACAGTGACGATGATTATTGGTGGGTAAGAGACGCTGAAGACATGTATGGAGAAAGAAAAAAGGCCAAAACCCGTAAAAATAGTCATGGTAATATAGATTCATGGTTAAATGGATTCAGCGGTGAGTTATTCAGAGCTCGAAGAAACAGCCATGATTCTGCAGCAAGCTGGGAAATTCCCAAGAGTGGTGGTGTTAGTAGTACCCCAAGCATGAGAGGAACAGTTTGTTATGTTGCTCCTGAATATGGTTTTGGTGAAGATTTATCAGAGAAGTGTGATGTATATAGTTTTGGGGTTCTATTACTTGTTATAGTTTCCGGGCGACGTCCACTTCAAGTGACCGGTTCGCCATTATCAGAGTTTCATAGAGCAAATCTACTGTCATGGGCACGCCATTGTGCACGCAATGGCAAGCTGCTCGATCTGGTCGATCAGTCTATTAAGTCATTAGACAAAGATGAAGCTCTTCTCTGCATCACAATTGCTCTTCTCTGCCTGCTCAAAACACCTTCTCGTCGCCCTTCAATGAAAGAGGTTGTGGGAATGCTTAGTGGTGAACTTGATCCACCACAGTTGCCAATTGAGTATTCACCTTCGACCCCATCTCGCTTCCGGGCCAAGGCTCGCAAAAAGGGCCCCTGA 2097 0.4816 MHSRKFPVSPSSPLVPDPHPPALSPNQPHPSYKNPKSHHLLPPLVASAASVCSFFLLFFLCFRRLARKRTTPSSDSESKPPFRFSYSVLRRATSSFSTRLGQGGFGPVYSGTLPPTRQPVAVKLMDSASLQGEREFHNELFFASRLHSQRVVSAIGFCSDRNRRRFLLVYELMHNGNLQDALLHRKCPELLDWKKRFSVILDIAKGIQYLHSCDPPVIHGDIKPSNILLDRSLSGKIGDFGLARLKSEPQIEIGILDLDGNEKKNGGLELEEEKKGKEEELESNGGSLLEETQSVNTVDEGSLAAEQSPEGFVRIPISEPSPGPLEAALVASPSEANFDKVSFESEKNISLSYKKNGKVIKSNSMKDWWWKQDMEEAAESRMGENKKVKDYVMEWLGKEINKERPKSEWVAATSSSGATMEKREKKKSKRRLEWWRSMDEETINPKAVKKKEKRRPAREWWKEEYCEELAKKKKKKKQQQKRNGINSDDDYWWVRDAEDMYGERKKAKTRKNSHGNIDSWLNGFSGELFRARRNSHDSAASWEIPKSGGVSSTPSMRGTVCYVAPEYGFGEDLSEKCDVYSFGVLLLVIVSGRRPLQVTGSPLSEFHRANLLSWARHCARNGKLLDLVDQSIKSLDKDEALLCITIALLCLLKTPSRRPSMKEVVGMLSGELDPPQLPIEYSPSTPSRFRAKARKKGP 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1877 698 MobiDBLite consensus disorder prediction 1 35 - -
Lele08g1877 698 ProSiteProfiles Protein kinase domain profile. 94 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1877 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Lele08g1877 698 Gene3D Transferase(Phosphotransferase) domain 1 173 265 - -
Lele08g1877 698 Gene3D Transferase(Phosphotransferase) domain 1 531 674 - -
Lele08g1877 698 MobiDBLite consensus disorder prediction 264 286 - -
Lele08g1877 698 MobiDBLite consensus disorder prediction 11 28 - -
Lele08g1877 698 Gene3D Phosphorylase Kinase; domain 1 82 172 - -
Lele08g1877 698 Coils Coil 462 482 - -
Lele08g1877 698 FunFam Os07g0541700 protein 173 253 - -
Lele08g1877 698 Pfam Protein tyrosine and serine/threonine kinase 96 246 IPR001245 GO:0004672|GO:0006468
Lele08g1877 698 Pfam Protein tyrosine and serine/threonine kinase 554 666 IPR001245 GO:0004672|GO:0006468
Lele08g1877 698 SMART serkin_6 94 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1877 698 MobiDBLite consensus disorder prediction 264 284 - -
Lele08g1877 698 PANTHER OS07G0586332 PROTEIN 23 696 IPR044576 -
Lele08g1877 698 MobiDBLite consensus disorder prediction 671 698 - -
Lele08g1877 698 SUPERFAMILY Protein kinase-like (PK-like) 71 685 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1877 Lele-ChrLele08 13132773 13134869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1877 546 665 Receptor kinase-like Gene Family AT3G58690 36.000 1.25e-11 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lele08g1877 PK_Tyr_Ser-Thr 6e-28 CL0016