Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1870 ATGTCAAGAAAGAGAGAGTGTAGCTGTGAAAAATCTTTGCATGGGGAAAAGGTAAGTTCACGCCAAACGCCTGCTCTCTGCTCTTCTTCCTCTGCACATATCAAAACCCCAGGTCTGCAGGAAGCAATGGAGGATGCTGCAACGGTGTTGTTTCGTACCGGCGAGCAGGGGAAAAAGGTTAAGCTGTTTTTAGTTATGGCGCTGTTGTTGTCGTTCCTTTGTTCCTTTGCTTCAACTCTCAGCGACGAAGGACAAACATTAATGAGTATCAAGGCTTCTTTCAGTATTGCAGCAAATGAGTTGCTTGATTGGGATGGTGTACAAAATGACGACTTTTGTTCTTGGCGTGGAGTATACTGTGATAAGACCAGCATTACTGTGCTTACTCTGAATCTGTCAAGTTTAAACTTGGGCGGCGAAATATCACTGGCCATCGGTGAATTAAGAAACTTGCAATCCATAGATCTCCAGGGGAATAAACTAAGTGGTCAAATTCCAGATGAAATTGGGAACTGTACCTCACTTATCCATCTAGATTTGTCTGATAACCAGCTCTATGGGGACGTGCCTTTCTCCCTATCAAAGCTAAAGCAGCTAGAGTTTCTAAATTTGAAGAATAATCAGTTGATTGGTCCTATTCCTTCAACACTAACCCAAATTCCTAACCTGAAAACGATTGATTTTGCTCGAAACCACCTCACTGGTGAGATACCAAGACTGCTGTATTGGAATGAAGTCCTGCAGTATCTAGGTTTGCGAGGGAACAATCTGACTGGAACTCTGTCCCCTGACATTTGTCAGTTAACTGGTTTGTGGTATTTTGATGTGAGAGGCAATAATTTAACGGGTACAATACCTGAAAGCATTGGAAACTGTACAAGTTTTGAGATTTTGGATTTATCATATAATCAGATGAGCGGGGAAATTCCTTACAACATTGGATTCCTGCAAGTTGCAACTTTGTCTCTTCAAGGTAATAGGCTGACTGGGAAGATTCCAGAGGTGATTGGTTTGATGCAAGCTCTTGCTATTTTGGATTTGAGTGAGAATGAGCTGGTGGGACCTATCCCTCCCATACTTGGCAATTTATCTTTTACTGGAAAGCTGTACCTCCATGGAAACTTGCTTTCTGGTCCTATTCCACCAGAACTTGGCAATATGTCTAGATTAAGTTACCTGCAATTGAATGACAACCAATTAGTTGGCAAAATTCCTGAAGAACTTGGAAGGCTTGGAAATTTGTTTGAATTAGATCTTGCCAACAATAATCTTGACGGACCTATTCCACATAACATCAGCTCTTGTGCAGCCCTGAATCAGTTCAATGTGCATGGTAATCGCTTGAGTGGATCCATTCCTCCGAGTTTTAGAACCCTTGAGAGTTTGACTTACCTAAATCTTTCTGCTAACAACTTCAAAGGGAGCATACCTGTTGAACTGGGCCACATCATAAATCTTGATACGCTGGATCTGTCAAGCAATAAATTTTCAGGTCCTGTTCCATCATCTGTTGGTGACTTGGAGCATCTCTTGACCTTGAACCTGAGCCATAACCTTCTTGATGGTCCATTGCCTGCTGAATTTGGGATTCTGAGAAGCGTACAGATTATCGATATTTCACACAACAGTCTTTCGGGAAGTATCCCTGTGGAAATTGGTCAGCTGCAGAACCTCGTGTCTCTGATACTGAACAACAATGGTTTGCAAGGGAGAATTCCAGATCAGCTAGCTAATTGCTTGAGTCTCTCCTCCTTAAATGTTTCGTACAATAATTTATCTGGAACTATTCCTCTTATGAGGAATTTCTCAAGGTTTTCAGCTGACAGTTTCATTGGAAATCCATTATTATGTGGGAAAAAGTTAGGATCATTTTGTGGTCCTTACTTGCCAAAATCCAGAGTGATTTTTCCAACGGTTGCAGTCCTTTGTCTCGCGTTGGGTTTCGTCACAATATTGGTAATGGTCATTATTGCTATTTATAGATCCAGCCAGTCAAAGCAATTCATGAAAGGGCCGAGCATATTTGAACAAGGTCCCCCCAAACTTGTAATTCTTCATATGGATATGGCCATTCATACCTTGAACGATATAATGAGAGCTACTGAGAATCTCAGCGAGAAATATATCATAGGGTATGGTGCCTCTAGTACAGTGTACAAGTGTAATTTAGACGGTTCCCGGCCAATGGCAATTAAGCGACTTTACAACCAGCATCCACACAATTTGCAAGAGTTTGAAACAGAACTTGAGACTGTTGGCAGCATCAGACACAGAAACCTTGTCACCTTGCATGGTTATGCACTGACCCCCAATGGAAATCTCCTATTCTATGACTGCATGGAGAATGGCTCTCTGTGGGATCTCCTTCATGGTTCCTTGAAGAAGGTAAAACTTGACTGGGAAACGCGATTAAGGATCGCTGTTGGTGCTGCTGAAGGACTTGCTTATCTTCATCATGATTGCAACCCTCGGATTATTCACAGGGATGTTAAATCCTCAAATATTTTGCTGGATGAGAACTTTGAGCCTCATCTTTCTGATTTCGGTATTGCTAAAAGCATATCAACAACAAGAACTCATGCTTCAACTTTTGTTCTTGGAACCATTGGGTATATCGATCCGGAGTATGCCCGGACTTCTCGGTTGAATGAAAAATCAGATGTTTACAGCTTTGGCATTGTTCTACTAGAGCTACTAACTAGGAAGAAAGCCGTAAATAATGAGTCTAACTTGCTACAATTGATATTGTCCAAGGCAGATAACAACACTGTAATGGAAGCTGTGGATCCAGATGTCTCAGTGACCTGCTTGGATCTGGCTCATGTGAAGAAGACCTTTCGGCTTGCTCTGCTATGCACCAAAAGAAACCATTCTGAGAGGCCTACCATGCATGAGGTTGCAAGGGTATTGTTGTCATTACTTCCTACACCGCCGCCTAATAAGGCGTTTACTGCCCCGGCGAAGATGCATGATTATGCTCAATTTTTGATAGAGCAGGGACGATGTCAAAGGATGTAG 3018 0.4215 MSRKRECSCEKSLHGEKVSSRQTPALCSSSSAHIKTPGLQEAMEDAATVLFRTGEQGKKVKLFLVMALLLSFLCSFASTLSDEGQTLMSIKASFSIAANELLDWDGVQNDDFCSWRGVYCDKTSITVLTLNLSSLNLGGEISLAIGELRNLQSIDLQGNKLSGQIPDEIGNCTSLIHLDLSDNQLYGDVPFSLSKLKQLEFLNLKNNQLIGPIPSTLTQIPNLKTIDFARNHLTGEIPRLLYWNEVLQYLGLRGNNLTGTLSPDICQLTGLWYFDVRGNNLTGTIPESIGNCTSFEILDLSYNQMSGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELVGPIPPILGNLSFTGKLYLHGNLLSGPIPPELGNMSRLSYLQLNDNQLVGKIPEELGRLGNLFELDLANNNLDGPIPHNISSCAALNQFNVHGNRLSGSIPPSFRTLESLTYLNLSANNFKGSIPVELGHIINLDTLDLSSNKFSGPVPSSVGDLEHLLTLNLSHNLLDGPLPAEFGILRSVQIIDISHNSLSGSIPVEIGQLQNLVSLILNNNGLQGRIPDQLANCLSLSSLNVSYNNLSGTIPLMRNFSRFSADSFIGNPLLCGKKLGSFCGPYLPKSRVIFPTVAVLCLALGFVTILVMVIIAIYRSSQSKQFMKGPSIFEQGPPKLVILHMDMAIHTLNDIMRATENLSEKYIIGYGASSTVYKCNLDGSRPMAIKRLYNQHPHNLQEFETELETVGSIRHRNLVTLHGYALTPNGNLLFYDCMENGSLWDLLHGSLKKVKLDWETRLRIAVGAAEGLAYLHHDCNPRIIHRDVKSSNILLDENFEPHLSDFGIAKSISTTRTHASTFVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTRKKAVNNESNLLQLILSKADNNTVMEAVDPDVSVTCLDLAHVKKTFRLALLCTKRNHSERPTMHEVARVLLSLLPTPPPNKAFTAPAKMHDYAQFLIEQGRCQRM 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1870 1005 SUPERFAMILY Protein kinase-like (PK-like) 684 970 IPR011009 -
Lele08g1870 1005 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 219 970 - -
Lele08g1870 1005 Gene3D Phosphorylase Kinase; domain 1 675 778 - -
Lele08g1870 1005 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 80 244 - -
Lele08g1870 1005 Gene3D Ribonuclease Inhibitor 320 627 IPR032675 -
Lele08g1870 1005 ProSitePatterns Protein kinases ATP-binding region signature. 710 732 IPR017441 GO:0005524
Lele08g1870 1005 Pfam Protein kinase domain 707 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1870 1005 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 355 628 - -
Lele08g1870 1005 SMART serkin_6 704 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1870 1005 Gene3D Transferase(Phosphotransferase) domain 1 780 978 - -
Lele08g1870 1005 SMART LRR_typ_2 268 292 IPR003591 -
Lele08g1870 1005 SMART LRR_typ_2 148 172 IPR003591 -
Lele08g1870 1005 SMART LRR_typ_2 459 483 IPR003591 -
Lele08g1870 1005 SMART LRR_typ_2 555 579 IPR003591 -
Lele08g1870 1005 SMART LRR_typ_2 196 220 IPR003591 -
Lele08g1870 1005 SMART LRR_typ_2 411 435 IPR003591 -
Lele08g1870 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Lele08g1870 1005 Pfam Leucine rich repeat N-terminal domain 81 121 IPR013210 -
Lele08g1870 1005 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 780 981 - -
Lele08g1870 1005 Gene3D Ribonuclease Inhibitor 80 243 IPR032675 -
Lele08g1870 1005 SUPERFAMILY L domain-like 367 621 - -
Lele08g1870 1005 ProSiteProfiles Protein kinase domain profile. 704 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1870 1005 SUPERFAMILY L domain-like 79 377 - -
Lele08g1870 1005 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 245 354 - -
Lele08g1870 1005 Pfam Leucine rich repeat 149 209 IPR001611 GO:0005515
Lele08g1870 1005 Pfam Leucine rich repeat 485 544 IPR001611 GO:0005515
Lele08g1870 1005 Pfam Leucine Rich repeat 291 308 IPR001611 GO:0005515
Lele08g1870 1005 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 675 779 - -
Lele08g1870 1005 Gene3D Ribonuclease Inhibitor 244 318 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1870 Lele-ChrLele08 13068828 13076068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1870 150 974 Receptor kinase-like Gene Family AT5G07180 78.667 0.0 1316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Lele08g1870 Pkinase 3.6e-41 CL0016