Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1859 ATGGAAGAAAAAGATAGTTTTTTCTCAGGGCTCACCGTGAAGGCTAACGATGCTCCGGAAAGCCACCATGTAACTCCGAGAAATGAAAACTATGGACTGTTTGGCGGGCCCACAGGAGCATCGCCCGCCATGGCCCCAACCCCAACCCCGGCACCTGCACCAGCTCCGACTACGGCTCCATCTCCAGCTTCAGCTAGAGCTCCAGTGCCAGCTTCAGTTTCTGCGCCGGAGCCGGTCAGTGTGGCGGCGGCGGCAACGACAGGGAGTACAGATGTAGTAAAGAAGAAAAGGGGAAGGCCTAGGAAGTACGGGCCAGATGGTAAATTAGCGTTGGCGTTGTCGCCGATGCCGATTTCATCGTCAATTCCGTTGACTGGAGACTACTCAATGTGGAAACGGGGTAGAGGGCGGCCAGTTGAATCGGTCAAGAAGTCGTCGTTTAAGTTCGATTTTGAAAGCCATGGACCAGGTGATGGGATTGCATACTCAGTTGGTGCCAATTTCACACCCCATGTGCTTACTGTTAATGCTGGCGAGGATGTTAATATGAAGGTCATGTCCTTCTCTCAACAGGGATCTCGTGCTATTTGTATTCTTTCTGCAAATGGAACAATTTCAAACGTTACACTGCGTCAACCAACTTCTTCTGGGGGTACCTTAACATATGACGGGCGATTTGAGATTCTTTCTTTGTCTGGTTCATATATGCCTTCTGAGAACGGTGTGACAAGAAGTAGATCTGGTGGGATGAGTGTCTCTTTGGCAGGTCCAGATGGTCGAGTTGTGGGAGGTGGCCTTGCTGGTCTGTTGGTAGCAGCAGGACCTGTGCAGGTTGTTGTGGGTAGTTTTCTTCCAGGCCACCAGCAGATGCAGAAACCCAAGAAGCAAAAGACGAATCATTTTTCGCCAGTTACATCTGGACACTATAATCCCATCCCAGTTGATGAAATAAAAATCAGTTTCGGAGGTGTAAAGCCTATTATGACTCCTGCTGCATTTCAAGCAGACAACAACACTGCTTCTTTTAACAATGTCCCAGGCTTTAGCAACTCATCTGCAGATGATGATGCCGACGAGGGTAATGATGTTGATACGACACTTTATCCTGAAAAGGACTCTAACCCTAGCCAAACAAATGCCGGAGTCGCATGCTAA 1155 0.49 MEEKDSFFSGLTVKANDAPESHHVTPRNENYGLFGGPTGASPAMAPTPTPAPAPAPTTAPSPASARAPVPASVSAPEPVSVAAAATTGSTDVVKKKRGRPRKYGPDGKLALALSPMPISSSIPLTGDYSMWKRGRGRPVESVKKSSFKFDFESHGPGDGIAYSVGANFTPHVLTVNAGEDVNMKVMSFSQQGSRAICILSANGTISNVTLRQPTSSGGTLTYDGRFEILSLSGSYMPSENGVTRSRSGGMSVSLAGPDGRVVGGGLAGLLVAAGPVQVVVGSFLPGHQQMQKPKKQKTNHFSPVTSGHYNPIPVDEIKISFGGVKPIMTPAAFQADNNTASFNNVPGFSNSSADDDADEGNDVDTTLYPEKDSNPSQTNAGVAC 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1859 384 MobiDBLite consensus disorder prediction 344 384 - -
Lele08g1859 384 CDD DUF296 169 283 IPR005175 -
Lele08g1859 384 ProSiteProfiles PPC domain profile profile. 165 304 IPR005175 -
Lele08g1859 384 MobiDBLite consensus disorder prediction 367 384 - -
Lele08g1859 384 MobiDBLite consensus disorder prediction 43 63 - -
Lele08g1859 384 Pfam Plants and Prokaryotes Conserved (PCC) domain 170 283 IPR005175 -
Lele08g1859 384 MobiDBLite consensus disorder prediction 86 108 - -
Lele08g1859 384 MobiDBLite consensus disorder prediction 288 307 - -
Lele08g1859 384 MobiDBLite consensus disorder prediction 289 306 - -
Lele08g1859 384 MobiDBLite consensus disorder prediction 1 71 - -
Lele08g1859 384 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 61 337 IPR039605 GO:0003680
Lele08g1859 384 Gene3D - 170 301 - -
Lele08g1859 384 FunFam AT-hook motif nuclear-localized protein 1-like 170 301 - -
Lele08g1859 384 SMART AT_hook_2 94 106 IPR017956 GO:0003677
Lele08g1859 384 SMART AT_hook_2 132 144 IPR017956 GO:0003677
Lele08g1859 384 SUPERFAMILY AF0104/ALDC/Ptd012-like 167 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1859 Lele-ChrLele08 12947628 12952273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1859 74 358 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 54.266 2.81e-92 281