Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1852 ATGATACTGCTCTTTGCTACCTATCCGCCTCTGCAACTTCCACTTCCTATCCCCTGGTTTTTGACCACCAGAGTGAGAGAGAAACCAAACAGACCCCGAAACATAATTTTTTTCCGGAGTTCGAAAGACAGAGAGAGCTTGTTGCTATCTTCGCCAAAACCATTAATGGGTTCTTCTTCAGTTCATCTCCTTCTTCTCTTCTCTCTCCTATTCTTTCTCTCTCACCCAACATGGGTCTGTGGAAATGCAGAGCTCAGAGCTCTCATGGACATGAAAGCTGCTCTTGACCCAGAAAGCCGTTATCTTTCTTCTTGGATTTCCAATGGGAATCCATGTCGTTTTGAAGGAGTGGCTTGTAACGAGAAGTGTCAAGTAGCTAACATTTCGTTGCAGGGGAAGGGTCTCTCTGGGAAGCTCTCGTCCGCCATTGATGGCCTCAAGCAATTAACAGGGCTTTACTTGCATTATAACTCTCTCTACGGTGAAATACCCAAAGAAATCGCCAACTTGCCTGAGCTCACTGATTTGTATTTGAATGTGAATCACTTCACCGGAGAAATCCCAACTGAGATCGGCAGACTGGAGAACTTGCAAGTTTTGCAGCTTTGCTACAATCAATTGAAGGGAAGTATACCTACTCAACTTGGTGGTTTGAAGAAGCTTAGTGTTATTGCTCTGCAGTCAAATCAATTAACTGGAGCTATCCCTGCTAGTTTAGGCAACTTGGGAATGTTAATGAGGCTCGACTTAAGCTCTAATCGCCTGTTCGGTTCGATCCCGTCCAAATTAGCCGATGCCCCTTCCCTGCAAGTTCTTGATCTTCGCAACAATACTCTCTCTGGGAATGTACCACCTGCTCTGAAGAGGCTTGAAGATGGATTCTTGTATGAATACAATTTGGGATTATGTGGAGCTGGGTTTTCATCCCTGAAGACTTGCAGTGCAACTGATCATGTTGATCCAAATAGGCTTGATCCGTATGGAGCTGGTATTAATGGTCAACCAACGAGGGGCATTCCAGAAACTGCGAATGTTAAGTTGCCCTGCAATGGAGATCGGTGCGAAAAGTCATCATCGAAATCTAAACAAACATCTGTAACTGTTGGCGTACTTGTGATTGCCATAGCAGTGTCAGCGGTTGGCATTCTAACGTTTGTGCATTATCGCCGGAGAAAGCAGAAGCTTGGGAACTCGTACGATGTCTCTGATAGCCGTCTAAGTACTGATCAAGCTAAGGCTGTCGTATACAGGAAAAATGGCTCTCCTCTAATCAGCCTTGAGTACTCCAATGGATGGGACCCTTTGGCTGATAGCAGGAACTTCAATGGGGATAGCCAAGACATGTTCCAAAGTTTCAGGTTCAACTTGGAAGAGGTCGAAACTGCGACTCAGTATTTCTCGGACTTGAATCTGTTAGGTAAGAGTAACTTCAGTGCAACTTATAAAGGAGTGTTGAGAGATGGGTCTGTAGTTGCTGTGAAGAGCATCAGCAAAACTAGTTGCAAGTCAGATGAAGCTGAGTTCTTGAAAGGGTTGAACATTTTGACATCACTGAGGAATGAGAATCTAGTTAGGCTCAGAGGCTTTTGTTGTTCTAGGGGACGAGGCGAGTGCTTTCTCGTTTATGATTTCGTTCCTAATGGAAATCTTTCGCGCTACCTCGATGTAGAAGAAGGTGATGGGCAAGTCCTTGAATGGTCAACCAGAGTTTCCATTGTCAAAGGGATTGCTAAAGGTATTGCATACTTACATGCACACAAAGCGAACAAACCTGCGCTTGTTCACCAGAACATCTCGGCTGAGAAAGTGCTCGTTGATCAGCGATTCAATCCATTGCTTTTGGATTCTGGCCTCTTCAAGATCCTCACAAACGACATCGTCTTCTCGGGGCTCAAGGCTAGTGCGGCAAAGGGCTATCTAGCGCCGGAGTACACGACCACCGGCCGGTTCACTGAGAAAAGTGATGTGTATGCTTTTGGAGTGCTTCTTTTCCAGATCCTCTCTGGGAAGCAGAAGATCACTAGCACAATGCGCCTCTTAGCAGAATCGTCGAGGTTCCTAGAAGTTATGGACCCGAATCTGAATGGCAAGTTATTCGAATTTGAGGCGGCTAAGTTGTTGAAGATGGCTCTGGTTTGTTCACATGAGTCTTCTTTTGAGAGGCCGTCCATGGAAACCATTGTTCACGAACTGAACCGTTGTAGTAGCTGTCTGTGA 2217 0.4551 MILLFATYPPLQLPLPIPWFLTTRVREKPNRPRNIIFFRSSKDRESLLLSSPKPLMGSSSVHLLLLFSLLFFLSHPTWVCGNAELRALMDMKAALDPESRYLSSWISNGNPCRFEGVACNEKCQVANISLQGKGLSGKLSSAIDGLKQLTGLYLHYNSLYGEIPKEIANLPELTDLYLNVNHFTGEIPTEIGRLENLQVLQLCYNQLKGSIPTQLGGLKKLSVIALQSNQLTGAIPASLGNLGMLMRLDLSSNRLFGSIPSKLADAPSLQVLDLRNNTLSGNVPPALKRLEDGFLYEYNLGLCGAGFSSLKTCSATDHVDPNRLDPYGAGINGQPTRGIPETANVKLPCNGDRCEKSSSKSKQTSVTVGVLVIAIAVSAVGILTFVHYRRRKQKLGNSYDVSDSRLSTDQAKAVVYRKNGSPLISLEYSNGWDPLADSRNFNGDSQDMFQSFRFNLEEVETATQYFSDLNLLGKSNFSATYKGVLRDGSVVAVKSISKTSCKSDEAEFLKGLNILTSLRNENLVRLRGFCCSRGRGECFLVYDFVPNGNLSRYLDVEEGDGQVLEWSTRVSIVKGIAKGIAYLHAHKANKPALVHQNISAEKVLVDQRFNPLLLDSGLFKILTNDIVFSGLKASAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQILSGKQKITSTMRLLAESSRFLEVMDPNLNGKLFEFEAAKLLKMALVCSHESSFERPSMETIVHELNRCSSCL 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1852 738 FunFam Protein NSP-INTERACTING KINASE 2 545 735 - -
Lele08g1852 738 Gene3D Transferase(Phosphotransferase) domain 1 545 737 - -
Lele08g1852 738 Pfam Leucine rich repeat N-terminal domain 82 120 IPR013210 -
Lele08g1852 738 Gene3D Ribonuclease Inhibitor 78 318 IPR032675 -
Lele08g1852 738 FunFam Protein NSP-INTERACTING KINASE 2 437 544 - -
Lele08g1852 738 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 127 733 - -
Lele08g1852 738 Pfam Protein tyrosine and serine/threonine kinase 471 731 IPR001245 GO:0004672|GO:0006468
Lele08g1852 738 FunFam Protein NSP-INTERACTING KINASE 2 192 314 - -
Lele08g1852 738 Gene3D Phosphorylase Kinase; domain 1 436 544 - -
Lele08g1852 738 SUPERFAMILY L domain-like 81 289 - -
Lele08g1852 738 Pfam Leucine rich repeat 220 279 IPR001611 GO:0005515
Lele08g1852 738 ProSiteProfiles Protein kinase domain profile. 466 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1852 738 SUPERFAMILY Protein kinase-like (PK-like) 442 732 IPR011009 -
Lele08g1852 738 FunFam Leucine-rich repeat receptor-like kinase 83 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1852 Lele-ChrLele08 12875068 12878716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1852 63 579 Miscellaneous Gene Families AT4G22730 55.303 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Lele08g1852 PK_Tyr_Ser-Thr 2.1e-35 CL0016