Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1844 ATGGAGTGCAATAAGGATGAGGCCACCAGAGCTAAAGAAATTGCTGAGAGGAAGTTTATTGCGAAGGATATTTTTGGGGCAAAGAAATTTGCTTTAAAGGCTCAAAGATTATTTCCTGAGCTTGAGGGTATTTCTCAAATGCTAGCTACACTTGATGTCCATATTTCTGCAGACAATAAAATAAATGGCGAAGCAGATTGGTACGGTATACTTGGTGCAGACCCTCGGGCTGATGATGAAAAAATCCGGAAACAATATAGGAAGCTGGCTCTCAACCTTCACCCTGATAAGAACAAGTCTATTGGAGCTGATGGTGCATTTAAACTTATTTCGGAGGCATGGAGTTTTCTTTCAGATAAGGCTAAAAAGGTGGCATATGATCAGAAGAGAAACATAAAAGCGCAGAAGGTTTCGATGAAGTCTTCTGGCACATCAGCACATCCAGGGACTAAAGGGAATTACAATTTTACAAAACCTGCCACTCCAAGTGCAAGAGCTCATAAACATACTACTAAACCAGATTCAACTTCTCACAAGTCGAAATCAAATACTTTCTGGACTGTTTGCAATCGATGCAAAATGCAGTATGAGTATCTTAGAGTTTATCTTAATTTGAAACTCCTGTGTCCCAACTGTCATGGGGCATTTTTGGCTGTAGAAACAGCTCCTCCACCTGCAAGTGGTGTAAGACCTGCTGCCTCATTTAACTTTTCCCGGCAGCAGCAAAATTTCAATAACCAGGTGCCTAGTAAAAACAAATCCAATGCAGGAAAGAACAAGACGACCTCAAATGTTGGAGCAGGTTATGGTAATACCGACTCCTTTAACCATACTGATTTCCAGTGGGCTCCATTTTCAAAAACTTCTGGTGTTTCAACAGCAGCTCAAGCTGCAAGTGTGGTTCAACAGGCATATGAGAAAGTGAAGCGAGAGCGTAAGGAGGCACAAGCAGCTACAAAAAGGGAACAGGCCTTACGAAGGAAGCAGCATGCTTCTAAAAAAGTTTATATGAATCCTACAAAGAGAAGAAGAGTCATGGAGGATTCTGGTGTAAGCAGCCATGGTAAGGAGCCTTCAAATCAAGCAGGAATGAGAAATGGAGGAGTAGGGGCAGGTAGCTCATGTGTCTCTAAACCTGGTAATTCTGATCGCATCTCAATTAATGGTAGCTTGAAGACCAGTGGTGCAGAAGCATCCCAGCTTGAGCTTAACAATCTTATGGTGAGAGCTAGAAAAGAAATTGACAAAAAACTGAAGGATATTAATTCAAATACTATTTCCAAGAGAGCAGTGACAGAGGGTGGAAATGGGTGTGAGAAAGAAAATGAGAAAGGAGAAAAATTTACATGTAGCTCTGAGAGATGTGATCAAAACAACCTCTGTAAGTCTGACAATAGGAATAGTGAATTCCATGCCATCAAGACTTCTGCTGGAACTACTATTGCTAATGTGGACGTTAAAACAATGACAATTGATGTCCCTGATCCTGATTTTCATGATTTTGATAAGGATCTAACTGATAGGTCTTTTGGTGAAAATCAAGTATGGGTTGCATATGATGATGATGATTGGATGCCTCGAATTTATGCTATGATTCATAGTGTGATTTCTTTGAGTCCATTAAAGATGCGGATCAGTTGGCTCAACTCAAAGACCAACGATGAACTGGCCCCTCTAAATTGGATCATTTCAGGCTTCTCTAAAACTTGCGGGGAGTTTAGAATGGGTAGATGTGAAATCAATAGCTCAGTTAATTCTTTTTCTCACAAGGTTAGATGGAGAAAAGGAGCTCATGGAGCCATCTGTATTTATCCCATGAAAGGGGATGTTTGGGCTCTATATAGGAATTGGTCACCTGATTGGAATGAGCTGACAGCAGATGAGGTGATACACAAGTATGATATGGTTGAGGTACTTGAGGATTTTAGTGAAGAAAATGGTGTTATGGTCATTCCCCTGGTAAAAGTGGCTGGTTTCAAGACGTTATTTCACGAGCACTTGGACCCAAGAGAAATTAGGACCATTCCAAGAGAAGAGATGTTTCGGTTCTCTCATCAGGTCCCTTCATACTTACACACAGGTAAAGAAACACCAGACGTCGTAAGGGGTTGCTGGGAGTTGGACCCAGCTGCTACTCCATCTGAACTTCTTGAGGTTATAAAAGCTGTAGAAGAGGAAGATACGGTAGGCGAGGAGGATAGTCCTGTAGAAGAAACAGAAAATGATGACATTAAAAGACCTAACTATGAGGAAATGATAGGTGATACAGGAAAAGTTGTGAATGAGAAGGTGAAAAATGATAAAGATATTCAGGGAATTGAAACTTTGAAAGAGGATAAACAGAAGGAACCAGCAAAAGCTTGGAAACGCTTGTTTGAGGTGGAACTTATGTCCATAGAGGGAAAAATTCTGGAGACTGAGGGCGCAGGAATTTTTCGTTTGAGGGAAGCACAGAGAAATGGAAGTCTTGAAACATTTTCTATGGATCAGAAAATCATCAATCATTATAGGAGGTATGATTTACGAAGTGAGGCCTTGTCCATCGAAACAGTACTATCAATGGAAGAAATGAAAATGAGCATTCTTTTGGACTTTGATCCTGCCGAGCAAACAGGCCATTAG 2622 0.4085 MECNKDEATRAKEIAERKFIAKDIFGAKKFALKAQRLFPELEGISQMLATLDVHISADNKINGEADWYGILGADPRADDEKIRKQYRKLALNLHPDKNKSIGADGAFKLISEAWSFLSDKAKKVAYDQKRNIKAQKVSMKSSGTSAHPGTKGNYNFTKPATPSARAHKHTTKPDSTSHKSKSNTFWTVCNRCKMQYEYLRVYLNLKLLCPNCHGAFLAVETAPPPASGVRPAASFNFSRQQQNFNNQVPSKNKSNAGKNKTTSNVGAGYGNTDSFNHTDFQWAPFSKTSGVSTAAQAASVVQQAYEKVKRERKEAQAATKREQALRRKQHASKKVYMNPTKRRRVMEDSGVSSHGKEPSNQAGMRNGGVGAGSSCVSKPGNSDRISINGSLKTSGAEASQLELNNLMVRARKEIDKKLKDINSNTISKRAVTEGGNGCEKENEKGEKFTCSSERCDQNNLCKSDNRNSEFHAIKTSAGTTIANVDVKTMTIDVPDPDFHDFDKDLTDRSFGENQVWVAYDDDDWMPRIYAMIHSVISLSPLKMRISWLNSKTNDELAPLNWIISGFSKTCGEFRMGRCEINSSVNSFSHKVRWRKGAHGAICIYPMKGDVWALYRNWSPDWNELTADEVIHKYDMVEVLEDFSEENGVMVIPLVKVAGFKTLFHEHLDPREIRTIPREEMFRFSHQVPSYLHTGKETPDVVRGCWELDPAATPSELLEVIKAVEEEDTVGEEDSPVEETENDDIKRPNYEEMIGDTGKVVNEKVKNDKDIQGIETLKEDKQKEPAKAWKRLFEVELMSIEGKILETEGAGIFRLREAQRNGSLETFSMDQKIINHYRRYDLRSEALSIETVLSMEEMKMSILLDFDPAEQTGH 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1844 873 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lele08g1844 873 Pfam Domain of unknown function (DUF3444) 489 696 IPR024593 -
Lele08g1844 873 MobiDBLite consensus disorder prediction 726 748 - -
Lele08g1844 873 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lele08g1844 873 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lele08g1844 873 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lele08g1844 873 MobiDBLite consensus disorder prediction 312 331 - -
Lele08g1844 873 CDD DnaJ 66 119 IPR001623 -
Lele08g1844 873 Coils Coil 298 328 - -
Lele08g1844 873 MobiDBLite consensus disorder prediction 340 381 - -
Lele08g1844 873 Gene3D DnaJ domain 53 147 IPR036869 -
Lele08g1844 873 MobiDBLite consensus disorder prediction 245 265 - -
Lele08g1844 873 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lele08g1844 873 PANTHER BNAC03G44070D PROTEIN 1 713 - -
Lele08g1844 873 SUPERFAMILY Chaperone J-domain 59 130 IPR036869 -
Lele08g1844 873 SMART dnaj_3 65 122 IPR001623 -
Lele08g1844 873 MobiDBLite consensus disorder prediction 137 180 - -
Lele08g1844 873 Pfam DnaJ domain 66 127 IPR001623 -
Lele08g1844 873 MobiDBLite consensus disorder prediction 137 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1844 Lele-ChrLele08 12816651 12820689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1844 4 228 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.764 3.62e-32 127