Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1832 ATGAGTGGTGCACCTAAGAGACCTCATGAAGAGACTGTTCATTCGTCATCAAATCACCCCCATGATAATTTGGGTTCATATTCTAAATTATCTTCATCTGTTTCAAATGAGTACCACGTTCCTTATGATTTAGGTCAGGATTCAAGGGTGACAAAGACACCCCGTATAGAATCTCGTGATGCAGACAGAAGATCTCCTCTCCACTCAGTGTATCGGATCCCATCTTCAAATGAGTTACATTCAGATCATCCTGTAAGCGCTGAAAACAGGATGGAATCAAGGGACTCCAAGGAAATTAGAGATCCACGGGTTGAGACCCGTGACGGAAAGATTGAGAAGAAGGAATTCCATGGTGAGGTGAGGAGGGATTCTCAGAGTTCTAAAAGTGATAAGGATCTACGTGTTGAAGGAAGAGGAGATGACACCAAGGATGTCAGGTATGAACGAGATAGACATAATGATTCAAAAGGTGACATTAAGACAGAAAAGGATGGTTATGGTGCAGTAAGTAGTAGCCACTTGAATTGGAAAGAATCTAAAGAATACCATAGGGGAAAAAGATATTCTGATTCCCCCAGTGGGAATTTGGATTCCTGGCATATGTCACGTGGAAATTCACAAGGCCCTCTTGAGGTTGGGAAGGAGGGTTCAACAGCAGAAGAGAGAGATTATATGGAAGCTCATGAAGCTGTTGGAGAGAACAAAGTTGATCCAAAAGGTGAAGATAAATTTAAAGAGAAAGATAGAAAAAGGAAGGATGTGAAGCATCGGGATTGGGGGGAGAGGGAAAAAGAAAGAAGTGAACGTAGAAGCAGTACACCGGCAATTAATACAAGTGGTGAGAACAAAGAATCTGTCAAAGAAGATAGAGATGTTGAAAGGTGGGATAGGGAGAGGAGAGATCTTCCCAAAGACAGGGAAAATTTAAAGGAGAAGGAAAAGGATCATGTTAAGAGGGAACCATGGAATGGAGTGGAGAAACAGACTTCACATATTGAGAAGGAAACTGGTGATGCATCAGTTAAAATGATAGAGCATGAAAATGCTGTACCAGAGCAGAAGAAACAGAAAGATTTTGAAAGCTGGAAAAATGTTGATAGGGAGGCTAGAGAAAGGAGGAAAGAAAGGGAGAATGATTTAGCAGGAGATAGACCTGAGAAGCGTATTAGGTGCCCTGACAAGGAATCAGATGATGGATATGCTGATGGGGATGGAGGCACAGAGAAGGAAAGAGAAGTCTATAATTATAGTGTTCAGCAACGTAAGAGGATGCAACGATCAAGGGGGAGTCCTCAAGTGGCTAATCGTGAACCTCCTTTTAGACCCCGTGCTCAGGACAATGAAGGGTCGCAAGGGAAAGTAGAAGTATCATCTGTTATTTATAAAGTTGGGGAATGCATGCAAGAACTGATAAAGTTGTGGAATGAATTTGAATCTTCTCAAATGGAGAAAACTGGTGAAAGCACTAATAATGGTCCAACTCTTGAAATTCGGATACCAGCTGAGCATGTTACTGCTACTAACCGCCAAGTTAGAGGAGGCCAGCTATGGGGGACTGATGTGTACACATATGACTCAGACCTTGTTGCTGTTCTCATGCATACAGGTTACTGTCGACCCACGGCCTCTCCACCTCCCGCTGCAATACAAGAGCTGTGCGCGGTCATTCAGGTGCTGCCTCCTCAGGATTGTTATATTTCTACCCTGAGAAACAATGTCCGCTCTCGTGCTTGGGGTGCTGCAATTGGTTGTAGTTATCGAGTTGAGCGGTGCTGCATTGTGAAGAAAGGAGGTGGAACTATTGATCTTGAACCTTGCCTTACACATACATCAACAGTTGAACCCACCCTTGCTCCATTGGCTGTTGAGCGGACAATGACCACTAGGGCTGCAGCTTCGAATGCGTTGCGTCAGCAAAGATTTGTTCGAGAGGTCACCATACAGTACAACCTCTGCAACGAGCCTTGGATCAAGTACAGTTTAAGCATTGTAGCTGACAAAGGTCTGAAGAAGTCACTCTATACATCTGCTCGTTTGAAGAAGGGAGAAGTTTTGTATTTGGAGACCCATTCGCGCAGATATGAGCTTTGCTTTACTGGAGAGAAAATGGTTAAAACACCAGCATCACAATCACATGACACAAACATAGAAAAGTCTCAAAATCACCACTCTCATTCTGCAAATGGTGATAAATCTGATAGTGATAATGTCATGATTGATGTATTTCGATGGTCTCGTTGTAAGAAGCCTCTGCCACAGAAAGCAATGCGAACGATTGGGATCCCTCTGCCCCTTGAACATGTGGAGGTATTGGAGGAGAATTTGGACTGGGAAGATCTACAGTGGTCACAGACTGGTGTTTGGGTTGCAGGAAAGGAATATACCCTTGCACGTGTTCATTTCTTGTCCATGCATTAG 2418 0.4355 MSGAPKRPHEETVHSSSNHPHDNLGSYSKLSSSVSNEYHVPYDLGQDSRVTKTPRIESRDADRRSPLHSVYRIPSSNELHSDHPVSAENRMESRDSKEIRDPRVETRDGKIEKKEFHGEVRRDSQSSKSDKDLRVEGRGDDTKDVRYERDRHNDSKGDIKTEKDGYGAVSSSHLNWKESKEYHRGKRYSDSPSGNLDSWHMSRGNSQGPLEVGKEGSTAEERDYMEAHEAVGENKVDPKGEDKFKEKDRKRKDVKHRDWGEREKERSERRSSTPAINTSGENKESVKEDRDVERWDRERRDLPKDRENLKEKEKDHVKREPWNGVEKQTSHIEKETGDASVKMIEHENAVPEQKKQKDFESWKNVDREARERRKERENDLAGDRPEKRIRCPDKESDDGYADGDGGTEKEREVYNYSVQQRKRMQRSRGSPQVANREPPFRPRAQDNEGSQGKVEVSSVIYKVGECMQELIKLWNEFESSQMEKTGESTNNGPTLEIRIPAEHVTATNRQVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPAAIQELCAVIQVLPPQDCYISTLRNNVRSRAWGAAIGCSYRVERCCIVKKGGGTIDLEPCLTHTSTVEPTLAPLAVERTMTTRAAASNALRQQRFVREVTIQYNLCNEPWIKYSLSIVADKGLKKSLYTSARLKKGEVLYLETHSRRYELCFTGEKMVKTPASQSHDTNIEKSQNHHSHSANGDKSDSDNVMIDVFRWSRCKKPLPQKAMRTIGIPLPLEHVEVLEENLDWEDLQWSQTGVWVAGKEYTLARVHFLSMH 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1832 805 MobiDBLite consensus disorder prediction 716 730 - -
Lele08g1832 805 MobiDBLite consensus disorder prediction 418 432 - -
Lele08g1832 805 MobiDBLite consensus disorder prediction 83 163 - -
Lele08g1832 805 SUPERFAMILY LCCL domain 513 581 IPR036609 -
Lele08g1832 805 MobiDBLite consensus disorder prediction 176 190 - -
Lele08g1832 805 Gene3D - 479 590 IPR036609 -
Lele08g1832 805 MobiDBLite consensus disorder prediction 50 67 - -
Lele08g1832 805 MobiDBLite consensus disorder prediction 18 39 - -
Lele08g1832 805 MobiDBLite consensus disorder prediction 707 734 - -
Lele08g1832 805 MobiDBLite consensus disorder prediction 215 271 - -
Lele08g1832 805 MobiDBLite consensus disorder prediction 191 205 - -
Lele08g1832 805 MobiDBLite consensus disorder prediction 282 417 - -
Lele08g1832 805 MobiDBLite consensus disorder prediction 1 452 - -
Lele08g1832 805 Pfam Histone deacetylation protein Rxt3 496 538 IPR013951 GO:0016575
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1832 Lele-ChrLele08 12711766 12719818 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele47g1091 47 16583877 16594594 Lele08g1832 08 12711766 12719818 CCT
Lele48g1153 48 16150300 16153909 Lele08g1832 08 12711766 12719818 CCT
Lele45g0297 45 2384533 2397818 Lele08g1832 08 12711766 12719818 CCT
Lele46g0325 46 2182626 2192762 Lele08g1832 08 12711766 12719818 CCT
Lele05g1994 05 14185562 14194101 Lele08g1832 08 12711766 12719818 hybridization
Lele06g1831 06 12854514 12862562 Lele08g1832 08 12711766 12719818 hybridization