Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1819 ATGCTCCAATTAGTCTCCCACGAAACGATATTGGATCTTGTGTTGTTAGATGTTTCGACAATGATTGGTGCCATTTTCTTTTATTTAATCCTATGCTACCGCTTATGTCCAACCTGTACAAGCATTGATCTGGTAACAACTTTATTTTCCTTGATTACTTCGTCAAACTGCAAAAACCAGAGAAAGTTGAACAAAAATTCCCATCCATGTCAAACTGTAGTATCCAATCTCATCATCATCATGAACTGTTTCCAGCTTCTGGTTCTTTTGCTTCTGTCACTGAACATGGTGCTTTCTCAGTTCTATCCAGATGAAAGAGCTTCTCTGTTGCTTCTGAGAGATTCCTTAACTTCTCAGACTTCAGATTTGCATGGGAATTGGACAGGACCACCTTGTATAGACAACCTAAGTAGATGGAAAGGTATCACTTGTTTTAATTGGCATGTTGTTCAGATTGTTCTTGACGGTTTTGAGCTTCTTGGCTATTTGCCTCCTGCATTTCCTCAGAACATAACATTCCTGACTCAGCTTAACCTCAGAAACAATTCAATTTCTGGGACTCTGCCAAATCTCACCAACTTGGTGTTCTTGGAACATGTTTTGCTTTCATATAATCGCTTCTACGGGTCGATTCCGGTCGAATATGTTGGATTGCCTGGTCTGAAAGAGTTGGAGCTGCAAATGAATTACTTAGATGGTCAAATCCCAGCTTTTGATCAACCATCATTGAATAGTTTCAATGTCTCTTATAATCATCTGGCAGGACAAATTCCTCAGACTTCTGTGCTACAAAAATTTCCTAAGAGTTCCTTTGATGATAATTCAGATCTATGTGGGAAGCCATTGGATATTTTGTGTCCTTCTCCTTCTCCTTCTCCCGAACCTTCCTCTGCACCAGCTCCAAGCCCAGGAGTTCCCAGAGAAAACAAGAGACTTCCAATATGGATTATTGCTTTGATTATTGCAGCACCTGCACTGGTTTTTTCTATAGTTACTATTGTCTTCTTCCTGTTCTGTAATAAAAAGGTTCAAGCAAAAGAAACAACAAGAAACAAATCTCCAGGGTATGGCTTTGGAGCATGGGCAAAGAATATGATGTCCTATTCATTGAGCAATGAAGATGCTGAAAGGACAGGCACATTGGAAATTTACAGCAAGGAATACCCAATTTTTGAGTTGGATGATATATTAAGGGCATCAGCAGAAATGCTAGGCAAGGGAAACTTAGGTACTACATACAAAGCAACACTTGAAACTGGTGCTGTTGTTGCTGTGAAGAGACTTGATCACATGAATGGACTGGGCAAGAAGGAATTATTCCTCCAGAATATGAAATTGCAAGCACGGTCGAAGCATGAAAATCTGGTTGAAATCATCTCTTTCTATTACTCAGAGGAGCAAAAGCTGGTTGTTTATGAGTTTATCCCTAGTTGTTGCTCTTTGTTTGAGCTTCTTCATGATAGTAGAGGAGTTGGAAGAACTCCTCTTGATTGGCCCACAAGGCTGGCTATAATCAAAGACATAGCAAGAGGTCTAGCTTTCCTTCATCACTCCTTGCCTTCACAAAAGGTCCCTCATGCAAATCTAAGAACAAGCAATGTCCTTATTCATCAAGATGCTCAAGGTTACCATTCCAAGCTCACAGACTTTGGCTTCTTACCTTTGCTTTCTGCTAAAAAATCTGCAGAAAAGCTAGCCATCGGCAAGTCGCCTGAATTCGCCCAAGGCAAGAAGCTGACACATAAAGCCGATGTCTATTGCTTTGGAATCATCATCCTCGAGGTAATAACTGGGAAAGTTCCAGGTGAAAGCCTTGGTGAGATTGAAGAAACAACCAGTGATATTTCTGAATGGGTGAGAACAGTTGTGAACAATGATTGGTCCACAGACATACTTGATGCAGAGATATTAGCAGCAAGAGAAGGGCATGGTGCTATGTTTGAGCTCACAGAGATAGCTTTACAGTGTACTGATATGACACCTGAGAGACGGCCTAAAATGAATGAAGTCTTTGCAAGAATAGAAGAGATAGAGCAAATGAAATCAGAGAATGAGTGA 2058 0.4052 MLQLVSHETILDLVLLDVSTMIGAIFFYLILCYRLCPTCTSIDLVTTLFSLITSSNCKNQRKLNKNSHPCQTVVSNLIIIMNCFQLLVLLLLSLNMVLSQFYPDERASLLLLRDSLTSQTSDLHGNWTGPPCIDNLSRWKGITCFNWHVVQIVLDGFELLGYLPPAFPQNITFLTQLNLRNNSISGTLPNLTNLVFLEHVLLSYNRFYGSIPVEYVGLPGLKELELQMNYLDGQIPAFDQPSLNSFNVSYNHLAGQIPQTSVLQKFPKSSFDDNSDLCGKPLDILCPSPSPSPEPSSAPAPSPGVPRENKRLPIWIIALIIAAPALVFSIVTIVFFLFCNKKVQAKETTRNKSPGYGFGAWAKNMMSYSLSNEDAERTGTLEIYSKEYPIFELDDILRASAEMLGKGNLGTTYKATLETGAVVAVKRLDHMNGLGKKELFLQNMKLQARSKHENLVEIISFYYSEEQKLVVYEFIPSCCSLFELLHDSRGVGRTPLDWPTRLAIIKDIARGLAFLHHSLPSQKVPHANLRTSNVLIHQDAQGYHSKLTDFGFLPLLSAKKSAEKLAIGKSPEFAQGKKLTHKADVYCFGIIILEVITGKVPGESLGEIEETTSDISEWVRTVVNNDWSTDILDAEILAAREGHGAMFELTEIALQCTDMTPERRPKMNEVFARIEEIEQMKSENE 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1819 685 SUPERFAMILY Protein kinase-like (PK-like) 401 678 IPR011009 -
Lele08g1819 685 ProSiteProfiles Leucine-rich repeat profile. 173 195 IPR001611 GO:0005515
Lele08g1819 685 SUPERFAMILY L domain-like 128 259 - -
Lele08g1819 685 Gene3D Ribonuclease Inhibitor 102 287 IPR032675 -
Lele08g1819 685 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 88 681 - -
Lele08g1819 685 Pfam Protein tyrosine and serine/threonine kinase 402 672 IPR001245 GO:0004672|GO:0006468
Lele08g1819 685 Gene3D Phosphorylase Kinase; domain 1 364 474 - -
Lele08g1819 685 ProSiteProfiles Protein kinase domain profile. 398 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1819 685 Gene3D Transferase(Phosphotransferase) domain 1 479 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1819 Lele-ChrLele08 12589109 12592996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1819 111 683 Receptor kinase-like Gene Family AT1G68400 34.548 2.72e-99 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele08g1819 PK_Tyr_Ser-Thr 2.8e-29 CL0016