Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1809 ATGGCCAAGCATGAAGATAGATTCAAGAATAATATGGAGAAGGTGAAGAAGTGGAAGTTGGCTTTGTTTGAAGCAGCTAACTTGTCTGGTTGGAGTTTAGAAAACGGGTATGAATTTGAGCTTATTCAAAGGATTGTTGAAGATGTCTCTGAACTTGGTTGGTTTTATACATTTTCTTTCAATTCTTACTATGTTATTTCCTTATGCTGTGTCATAAAGGGGTCAAGCAAAGTTCAAGGCATGATGGTGAACCTCCCAGATCATTATATGGAGCCATTTAAGTATTTGGACTCTTTGACATCTATGGATTTGAGCCAGTGTGATCACCTAACAAAACTACCTGACATTTCTGGAGTTCCAAACTTGACAGAATTAAACCTTGATTATTGTGCAAATTTAGAAGAGGTTCATGATTCTGTTGGATCTCTTGAGAAACTTGTAGAGTTGAGGGCTTCCGGTTGCACCAAACTAAGGGCATTTCCACGTGTCATTAGGTTGCCATCACTCAAAAGTTTGATCCTTGTATGTCTCAAGGAATTACCAGAAAGGTTTGACATGCTACAAAATCTAAGAAACTTTGACATTGAGGGTTGTCCAACAATTAGAAATTTTTTGAAGAAGTTGAAAGACATGGGACAACATGCCTCTACCTTTCATAATGTTGATTCGTTGAATCTAGAAAATTGTGACCTATTAGATGAAGATCTTCCCATAATTTTACACTCTTTTCCTGAGTTGACTTCACTAAACCTTTCAAGGAACAAATTTGTAATTCTTCTATCTTGCATACAGAAGTTTCTTTACTTGCAATTACTTCACTTAGACAATTGCAAGTTTCTCCAAGAAATTCCAAGCCTACCTCCTAATTTAGGATTCATTAATGCAACTAATTGCACATCATTGAATGCAGATTCATCAAGTTTATTATTGAGTCAGGAAAGGGAGTTGCATGTTATAGTGCCTGGAGCTGGCATTCCGACGTGGTTTGATTTCTGCAGCAAAGGAGAGTATATGACTTTTTGGGTTCGTGAGAAATTTCCAGTGATTTCTCTATGTTATGTTTTTGCAGTAGAGGGTGAAATGAAGACGAAGGGTTTCAGTTGTGAAGTTCACTTTTTTATCGATGGTGAAGAATTGTATGAATTTGAAATACCATCAAGCTTTTCAGAAATGAAGACAGATCATGTTTGGCTATTTGATCTGCAAACTCTACCTCACTTCCAGGGCAATGCGTTTGATTCTTATTTAGGTGATAACTGGAATCAGATAGAGATTTCTTGTGAGAAAATGTCTGAAGTTCCAAATGTAACTGTGACTTGGTGTGGTATATATGTAAGCAAGCAAGAACAAAATTCAATCAGATTCACAGACCCTTATTTGGATTCAGATTCCATCACAGAATCTAATAAAAATGAGACTGAATTGAAGATTCTCAGTGGTAATGACAAGTCAGTGGAAGATTTTCAAGCCTGTGAGACAGAGGATAGCAAAATAATTCTTGAATGCTGTGGAAATGAGATAAACATAACTCAAGATGATGATGACGATGATGATGAAATGGAAGCATTTTATGCTTCTTTAGATGCTGAGACTTTTGTTCCATTACCTTCAAAAGATATCAGACCAAGTGAAGGAATCCAAAAGGCATGGAACACATTTCAAGAGTTTCTGACCAAAGATTTTTCTGAAATGTTGGAGCCTAAGAATTACAGTACCATGAAAGCTACATTAGATTTTCTCTCTGGATTATCTGCAGATGACGGAGTTTCAGTGGAAATGAGATCAGTGATAATAGAAGTTTCTAGAGAATTTACTCATTGGAGTTGGGATTACAGCAATGCAAGCAAGAAAATGGAGATTACAAAAGTCAGCATGTTGAAAGTGCATGAAATAGCAGAAGTTCTTGAAGCTAACAAGAGCCATTTCAAGGAAGTGATGGGCGTGAAGAATGAGTTGGAGAGCCAATTGGCTTATTTAGAAGAGACAAAGAAAGAGCTAGAGGATCAAATCAAAGCCATTAAATCTGATATCAATGCTTTTGAATCAGCTAAGAAAATGGCTACTGAGAGAAAGAGAGAAATTTTTGAAGAAGGAAAGCTGCTCATAGCTCAAAGAGATGAGTTGAGAGAACAATTGCCATGCTTGAGGGAGGACTTGGCACTGGCCAAGGAGATCCAAACAAATATCAATACTGAATGGGGTCTCCGTCGCGGCCAGTCGAGGTGTTTGGAAACGGTATCAGCACTGCTGGATTCGCAGCAGAACGTAGGCGAAAAATTCTCTTGTATTTATTATATTAAGGCATCTGATATAAAAGACAAAATGATGCATCAGAATACAAGTATGGACATGGAATATGAATGTGAAGAATTTAATAGTTCCAAGCGAGCAAAATTGACTTCTAAAGTATGGGAAGATATGCTGAGAATTCAAACAAGTGATGGCAGTAAAGTTCAATGCAAACACTGTGGCAGGTTGTTGCAAGATAACTGTGGAACTTCTCATTTAAAGCGGCACATAGTCAGATGTCCCAAGCGTCCAAAAACAGTGGATGGCGTTGACCAAGAGCTAATGACTTTACCACATGTTGAAGACACAGTTGTTGACAAAGAATTTGGACCGAACACAGTATATGTGGCTCACCCGTTAAAGGCGGAACCATTTGTCACTTCTTTTCCTGAGACACCAAGTAGTCAAGGATCTATCATTACTGATTCTGCTACTGGGCGAGAACAACATCTAAAGACCAAATCCATTTTGAGATTGGCTAACATTGAATCTCCCAAAAACCAGATTGATCTAACTTTGGATGATGCAGAAATGAGAGCATTTTATGCTTCATTGGATGCTGAGACCTCAGTTGTGTCACCTCCCCAAGATAATAGGGCCAGTTGTGAATTACTCAGAACTCCACCGTGTGAAGAGACTGAGAAAGCTTTAAAAACATTGCAAGATTTCCTCTTCAGAGACTTTTCTATTGTATTGCTTTCCAATCAGCGCAATTCGATGAAGTCCACCTTAGATTACCTTTCCAACCTCACAGACAATGATGGGATCTCTCTGGAAGTGCGCTTATTAATATCAGAAGTTTCAAAAAGATTTACTCAGTGGAGTTCTGAATATAATAATGCTGGCCGACAAATCGAGTGTTCTAGCACCAGCCTGTTGAAAGCAGATAAACTAGAAGAAAGTCTTGAAGCCAACAGGAACCAGTTTAAAGAACTCGCGTCATTAGAAAGCGAGCTAAGCAGCCAGTTAGCTGGTTTGGAGGAAAAAAAGAAAGAATTGGAAGAGCAGCTAAGCGGCATTAAGGCAAACATCTGTGTTTTTCAGTCAGCGAAGAATACGGCGACGAAGAGAAAGAGGGAAATATTCGAGGAAGGAAAGACCCTAAAAGCACAAAGAGATGAGTGGAAAGGACAAGCCCCACACTTGAGAGACGAGTGGGAATTGGCTAAGAAAACCCAAGCAAATATAAAAGCTGAATGGTCAAAGCTAGCAGAAAAATTTAGTGAAAGGCTAGATGGTGTAAACTGTAAGTACTTTGATGGTAATAACAGGCGCATTGAGCCTTCTGAAAATTAA 3585 0.3849 MAKHEDRFKNNMEKVKKWKLALFEAANLSGWSLENGYEFELIQRIVEDVSELGWFYTFSFNSYYVISLCCVIKGSSKVQGMMVNLPDHYMEPFKYLDSLTSMDLSQCDHLTKLPDISGVPNLTELNLDYCANLEEVHDSVGSLEKLVELRASGCTKLRAFPRVIRLPSLKSLILVCLKELPERFDMLQNLRNFDIEGCPTIRNFLKKLKDMGQHASTFHNVDSLNLENCDLLDEDLPIILHSFPELTSLNLSRNKFVILLSCIQKFLYLQLLHLDNCKFLQEIPSLPPNLGFINATNCTSLNADSSSLLLSQERELHVIVPGAGIPTWFDFCSKGEYMTFWVREKFPVISLCYVFAVEGEMKTKGFSCEVHFFIDGEELYEFEIPSSFSEMKTDHVWLFDLQTLPHFQGNAFDSYLGDNWNQIEISCEKMSEVPNVTVTWCGIYVSKQEQNSIRFTDPYLDSDSITESNKNETELKILSGNDKSVEDFQACETEDSKIILECCGNEINITQDDDDDDDEMEAFYASLDAETFVPLPSKDIRPSEGIQKAWNTFQEFLTKDFSEMLEPKNYSTMKATLDFLSGLSADDGVSVEMRSVIIEVSREFTHWSWDYSNASKKMEITKVSMLKVHEIAEVLEANKSHFKEVMGVKNELESQLAYLEETKKELEDQIKAIKSDINAFESAKKMATERKREIFEEGKLLIAQRDELREQLPCLREDLALAKEIQTNINTEWGLRRGQSRCLETVSALLDSQQNVGEKFSCIYYIKASDIKDKMMHQNTSMDMEYECEEFNSSKRAKLTSKVWEDMLRIQTSDGSKVQCKHCGRLLQDNCGTSHLKRHIVRCPKRPKTVDGVDQELMTLPHVEDTVVDKEFGPNTVYVAHPLKAEPFVTSFPETPSSQGSIITDSATGREQHLKTKSILRLANIESPKNQIDLTLDDAEMRAFYASLDAETSVVSPPQDNRASCELLRTPPCEETEKALKTLQDFLFRDFSIVLLSNQRNSMKSTLDYLSNLTDNDGISLEVRLLISEVSKRFTQWSSEYNNAGRQIECSSTSLLKADKLEESLEANRNQFKELASLESELSSQLAGLEEKKKELEEQLSGIKANICVFQSAKNTATKRKREIFEEGKTLKAQRDEWKGQAPHLRDEWELAKKTQANIKAEWSKLAEKFSERLDGVNCKYFDGNNRRIEPSEN 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1809 1194 SUPERFAMILY beta-beta-alpha zinc fingers 801 845 IPR036236 -
Lele08g1809 1194 SMART bed5 798 846 - -
Lele08g1809 1194 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 82 204 - -
Lele08g1809 1194 Coils Coil 1058 1106 - -
Lele08g1809 1194 ProSiteProfiles Zinc finger BED-type profile. 798 850 IPR003656 GO:0003677
Lele08g1809 1194 Gene3D Ribonuclease Inhibitor 212 317 IPR032675 -
Lele08g1809 1194 Gene3D Ribonuclease Inhibitor 80 211 IPR032675 -
Lele08g1809 1194 Coils Coil 705 725 - -
Lele08g1809 1194 Coils Coil 649 683 - -
Lele08g1809 1194 Gene3D - 1 53 IPR035897 -
Lele08g1809 1194 SUPERFAMILY L domain-like 95 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1809 Lele-ChrLele08 12485233 12496301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1809 96 319 WRKY Transcription Factor Family AT4G12020 27.016 9.68e-09 58.2