Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1789 ATGACCGGTCGTGGGCCAATCATGTGGCTCGCCCCCTCGTTGTACCCGACAAACTTAGCGGGTCCCACCATCACAATATGTCTTAGCATTCCACGTCTCGATCCACGTGGGAATATGGATAACTCAGTAAAGTCTTCAATTGCTTCCACCTACGGTTTCTCTGTTTTGCTGGAAAGCGAAGCGGAGTGGGAGGTAAAGCACACTGGATTTTTAGGGTTCCGTTGTTGGTTAGCTTCCGGTGGTTTAGGACTTCATTGTGGGGATGGTTTTTACTGTTTGAAGATTTCAGTTTTAGTGACTGGTGTTTCTGTTGGGGAGTTTTTCATAGAATGCCTGTCAACCTTTGTTTGCAACGTGTTCTTCCTCATGGTGAGAAAGAAGAGAACTGAAGTTCCTAGTGGAGGTGAAAGCTCTGAGACTCATGAAAGTGGGGGAAGCGGAAGAGGAGGTGTTCAGCGCCCTCCAGAAAGGAGTGCTCAAGGCCCTCAACAGTCTGCTGGAGGACCCCAAGGAGGTAGAGGCTGGTATCCTCAAGGAGGGCGTGGGGGTTATGGGGGACGTGGTCGTGGTCCACCCCAACAGCAGTACAGTGCCCCCCCTGATTATCAAGGCAGGGGGAGGGGAGGATCTTTTCAACAGGGAGGTCGTGGTGGATTTCGTGGTGGTCGGGATGGTGCTGGCACAAGTGGACGTGTTGGAGGACCTTCATATGGTGTCCCATCCCGACCAGAAGTTCCCGAGCTGCACCAAGCAACCTCAGCTTCATATCAAGCTGGGGTGACTCCTCAGTCTGCGATATCTGAGGCCAGTTCTGTTTCACAACTTCCTGAGATGACACAGGTGGAACAGCAAACTAAGCAGTTAACCATTCATCCAGAAGTTTCTTCTGCCCCCCCAGCCTCAAGTAAATCGGTGAGGTTTCCCCTTCGGCCTGGAAAGGGTAGCTATGGCACAAAGTGTATAGTCAAAGCTAATCACTTCTTTGCTGAGTTACCTAACAAAGATCTTCACCAGTATGATGTAACCATAACTCCAGAAGTGCCATCCAGAGGTGTAAACCGTGCTGTTATGGAGCAGCTGGTTAGGCTGTACCGTGAGTCTCATCTAGGCATGAGACTACCTGCATATGATGGTCGCAAGAGCCTGTACACTGCTGGTCCTCTTCCTTTTGTTTCAAATGAGTTTAGAATCACTCTCATTGATGAAGAGGAAGGAGCAGGAGCAGGCGTTCAAAGGAGAGTGAGGGATTTCAAAGTTGTGATAAAATTAGCTGCCCGAGCTGACCTTCACCACTTAGGAATGTTTTTGCAAGGAAGACAAACAGACGCACCTCAGGAAGCCCTTCAGGTTCTTGACATTGTTCTACGTGAACTACCGACCACTAGGTATTGTCCTGTCGGAAGATCTTTCTATTCACCTGATATAGGTAGGAGGCAACCATTAGGTGAGGGTTTAGAGAGCTGGCGTGGGTTTTACCAAAGTATCCGTCCAACTCAGATGGGATTATCACTAAACATTGATATGTCGTCAACGGCATTTATTGAACCATTGCCAGTAATTGATTTTGTCACTCAGCTGCTGAACAGGGATGTCACATCTCGTCCATTATCTGATGCTGATCGTGTAAAGATCAAAAAAGCACTTCGTGGAGTCAAAGTTGAAGTAACACACCGTGGAAACATGAGAAGAAAATATCGCATCGCTGGCTTGACATCACAGGCAACTAGAGAGCTAACATTCCCTGTTGATGAGAGGGGGACTGTGAAATCTGTTGTGGAGTACTTTTATGAGACGTACGGATTTGTCATTCAACATACTCAGTGGCCTTGCTTACAAGTGGGAAATACAAATAGACCAAACTATTTACCAATGGAGGTTTGCAAGATAGTAGAAGGTCAAAGGTACTCAAAGAGGTTGAATGAGAGGCAGATTACTGCTTTGCTTAAAGTCACCTGTCAGCGACCTCTTGATAGGGAGCGAGATATCATGCAGACGGTTCATCATAATGCTTACCATGAAGATCCTTATGCTAGAGAGTTTGGAATCAAAATCAGCGAGAAACTCGCGCAAGTTGAAGCTCGCATTCTTCCTGCACCTTGGCTGAAGTATCATGATACAGGAAGAGAAAAGGATTGTCTTCCTCAGGTTGGCCAGTGGAATATGATGAATAAGAAAATGGTCAATGGGGGGACTGTTAACAACTGGATGTGCATAAATTTTTCAAGGAATGTTCAAGACAGCGTGGCCAGTGGCTTTTGTTATGAACTTGCACAGATGTGTTATATATCTGGCATGGCATTTAATCCAGACCCAGTGCTTCCTGTGATCAGTGCCCGCCATGACCAGGTGGATAAGGTTCTGAAATCACGCTATCATGATGCCAAGGCAAAGCTGAAGGACAAAAAGGATCTTGATCTGCTTATTGTTATTTTGCCTGATAATAATGGCTCTCTTTATGGTGATCTGAAACGTATTTGTGAGACGGATCTTGGGGTTGTTTCCCAGTGCTGTTTGACAAAACATGTCTTTAAAATGAACAAGCAGTACCTTGCAAATGTTGCTTTAAAAATCAACGTGAAGGTTGGTGGAAGGAACACAGTGCTTGTTGATGCACTTTCAAGACGCATACCTTTAGTTAGCGATCGACCCACAATTATATTTGGAGCTGATGTTACTCATCCACACCCTGGGGAGGATTCTAGTCCATCGATAGCAGCTGTTGTGGCTTCTCAAGATTGGCCTGAAATCACCAAGTATTCAGGTCTGGTTTGTGCTCAAGAACACAGGCAGGAGCTCATCCAAGACCTTTTCAAACAGTGGCAAGATCCATTGAGGGGGACAGTGACTGGTGGAATGATAAAGGAGCTTCTCATATCTTTTCGAAGAGCCACAGGGCAGAAGCCACAACGCATCATATTTTACAGGGATGGTGTGAGTGAAGGGCAATTTTATCAAGTTTTACTTTTTGAGCTTGATGCTATCCGCAAGGCATGTGCATCATTAGAACCTAACTATCAGCCTCCTGTCACTTTTGTGGTGGTTCAAAAGCGCCATCACACAAGGCTGTTTGCTAACAACCATCATGATCGGCATTCGGTTGACCGTAGTGGGAATATATTGCCTGGTACGGTCGTAGACTCCAAAATTTGTCATCCAACTGAGTTTGACTTCTATCTTTGTAGCCATGCTGGGATACAGGGTACAAGCCGACCTGCCCATTACCACGTGTTATGGGATGAAAACAATTTTACTGCCGATGCACTTCAGACACTTACTAACAACCTCTGCTACACTTATGCAAGATGCACGCGATCTGTTTCAATCGTTCCTCCTGCATACTATGCACACTTGGCAGCTTTCCGAGCTCGATTTTATATGGAACCTGCTACATCGGATAGTGAGTCTATGAGTGCTGCTGGACGAGGAGCGGGCGGCGGCCCAGGACGTAGCACTCGTGCACCTGGTGCAAGTGCTGCGGTCAGGCCTCTTCCTGCTCTTAAGGATAATGTGAAGAGGGTCATGTTTTATTGTTAA 3534 0.4649 MTGRGPIMWLAPSLYPTNLAGPTITICLSIPRLDPRGNMDNSVKSSIASTYGFSVLLESEAEWEVKHTGFLGFRCWLASGGLGLHCGDGFYCLKISVLVTGVSVGEFFIECLSTFVCNVFFLMVRKKRTEVPSGGESSETHESGGSGRGGVQRPPERSAQGPQQSAGGPQGGRGWYPQGGRGGYGGRGRGPPQQQYSAPPDYQGRGRGGSFQQGGRGGFRGGRDGAGTSGRVGGPSYGVPSRPEVPELHQATSASYQAGVTPQSAISEASSVSQLPEMTQVEQQTKQLTIHPEVSSAPPASSKSVRFPLRPGKGSYGTKCIVKANHFFAELPNKDLHQYDVTITPEVPSRGVNRAVMEQLVRLYRESHLGMRLPAYDGRKSLYTAGPLPFVSNEFRITLIDEEEGAGAGVQRRVRDFKVVIKLAARADLHHLGMFLQGRQTDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDIGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVTSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRIAGLTSQATRELTFPVDERGTVKSVVEYFYETYGFVIQHTQWPCLQVGNTNRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPLDRERDIMQTVHHNAYHEDPYAREFGIKISEKLAQVEARILPAPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNNWMCINFSRNVQDSVASGFCYELAQMCYISGMAFNPDPVLPVISARHDQVDKVLKSRYHDAKAKLKDKKDLDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKHVFKMNKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYSGLVCAQEHRQELIQDLFKQWQDPLRGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRHSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPATSDSESMSAAGRGAGGGPGRSTRAPGASAAVRPLPALKDNVKRVMFYC 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1789 1177 ProSiteProfiles Piwi domain profile. 806 1127 IPR003165 GO:0003676
Lele08g1789 1177 SMART PAZ_2_a_3 521 653 IPR003100 GO:0005515
Lele08g1789 1177 Pfam Argonaute linker 2 domain 657 703 IPR032472 -
Lele08g1789 1177 Gene3D - 695 869 - -
Lele08g1789 1177 CDD Piwi_ago-like 675 1126 IPR045246 -
Lele08g1789 1177 Pfam PAZ domain 521 646 IPR003100 GO:0005515
Lele08g1789 1177 Pfam Argonaute linker 1 domain 465 515 IPR014811 -
Lele08g1789 1177 MobiDBLite consensus disorder prediction 131 309 - -
Lele08g1789 1177 SUPERFAMILY Ribonuclease H-like 793 1128 IPR012337 -
Lele08g1789 1177 FunFam Protein argonaute-2 510 636 - -
Lele08g1789 1177 MobiDBLite consensus disorder prediction 248 302 - -
Lele08g1789 1177 SMART Piwi_a_2 806 1127 IPR003165 GO:0003676
Lele08g1789 1177 Gene3D paz domain 510 635 - -
Lele08g1789 1177 ProSiteProfiles PAZ domain profile. 517 631 IPR003100 GO:0005515
Lele08g1789 1177 Gene3D - 875 1177 IPR036397 GO:0003676
Lele08g1789 1177 FunFam Argonaute 10 695 869 - -
Lele08g1789 1177 Pfam Piwi domain 807 1126 IPR003165 GO:0003676
Lele08g1789 1177 Pfam N-terminal domain of argonaute 319 455 IPR032474 -
Lele08g1789 1177 MobiDBLite consensus disorder prediction 1135 1158 - -
Lele08g1789 1177 SUPERFAMILY PAZ domain 321 668 IPR036085 GO:0005515
Lele08g1789 1177 CDD PAZ_argonaute_like 516 630 - -
Lele08g1789 1177 FunFam protein argonaute 10-like 875 1177 - -
Lele08g1789 1177 SMART DUF1785_2 464 516 IPR014811 -
Lele08g1789 1177 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 295 1128 - -
Lele08g1789 1177 Pfam Glycine-rich region of argonaut 199 297 IPR024357 -
Lele08g1789 1177 Pfam Mid domain of argonaute 714 789 IPR032473 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1789 Lele-ChrLele08 12296554 12303755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1789 201 1177 Eukaryotic Initiation Factors Gene Family AT1G48410 80.894 0.0 1607