Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1786 ATGGCCAGGGTCGGGTTGCCACCAGGTTTTCGGTTCCATCCGACCGACGAAGAGCTTGTCAATTACTATCTCAAGAGGAAGATCAATGGCCAAGAAATTGAACTTGACATCATTCCTGAGATTGATCTCTACAAATGTGAACCTTGGGAACTTGCAGACAAGTCATTTCTGCCAAGTAGAGATCCAGAATGGTACTTCTTTGGACCCAGAGATAGGAAATACCCTAATGGTTTCAGAACTAACAGAGCCACAAGAGCTGGGTACTGGAAGTCCACTGGCAAGGACAGAAGGGTCACTTCCCAAAACAGACCCATTGGCATGAAGAAAACTCTTGTTTACTACAGAGGCAGAGCCCCTCAAGGCATCAGAACTGACTGGGTCATGCACGAGTATCGCCTCGACGACAAAGAATCTGAGGACACCTCCGGAATACAGGATACTTATGCATTGTGCCGTGTGTTCAAGAAAAATGGAATCTGCTCTGAAATTGAAGAGCAGGGGCAGAGTAGTTTAACACTAATTGAGAGCTCACACACCCTAAATATTAATAATAATGAAAGTGAAACAATGTCTCCAGATCCAGCTGGAGCATCTTCATGTTTGGAGGAGGAAGACAAAGATGATTCATGGATGCAGTTCATTACAGATGATGCATGGTATCCTTCTAATGCAGCCATGGCAGGTTGTGAAGAAGTTTCTCATTTTACATTCACAAACTGA 720 0.4431 MARVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEIDLYKCEPWELADKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTSQNRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKESEDTSGIQDTYALCRVFKKNGICSEIEEQGQSSLTLIESSHTLNINNNESETMSPDPAGASSCLEEEDKDDSWMQFITDDAWYPSNAAMAGCEEVSHFTFTN 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1786 239 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Lele08g1786 239 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Lele08g1786 239 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Lele08g1786 239 MobiDBLite consensus disorder prediction 183 202 - -
Lele08g1786 239 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Lele08g1786 239 FunFam Nac domain-containing protein 86 15 159 - -
Lele08g1786 239 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1786 Lele-ChrLele08 12269427 12273282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1786 1 228 NAC Transcription Factor Family AT3G17730 76.667 6.73e-130 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele08g1786 NAM 9.5e-40 No_clan