Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1782 ATGGGAAGAGTAAGCATTTCAAACCATATGACATCTGTAACATTGAAACGGTTACTTCTTTTTACTCCTGCTCCAGATAAAATTGTTAGGCAAGAGAGCACAATGTCGAACTATTGTGGCATAGTCAGTAACCGCCATCCAGATGGCAGCACAAAATCTGAAAATGTTGTCTGCAGGAAGGATATAACTACTACTGGAGATAATTTTACTCCCAAGGCAAGGAAACCATATACCATTACTAAGCAAAGGGAGAAGTGGACAGAGGAGGAGCATCTGAAGTTCATTGAAGCTTTGAAATTGTATGGTCGTGGTTGGCGTCAAATTGAAGAACATGTAGGTACCAAAACTGCAGTTCAGATTCGAAGCCATGCACAGAAGTTCTTCTCTAAGGTTGCGCGGGAATCTGATGGCAGCACTGAAAGTTCTTTAAAGCCAATTGACATACCTCCTCCTCGACCAAAAAGGAAACCGTTGCATCCATATCCTCGCAAATCAGCTGACTCGTTCAAAGGACACTCAAATGAATCAAAAAGATCTCCATCTCCAAACCTGTCAGCTACAGTGAAAGACACCCAATCTCCAACTTCAGTGTTATCTGCATTTGGTTCAGAAGCATTTGGATCAGCTTTTTCTGAACAGAATAATAGATGTCCTTCCCCAAATTCCTGCACTAATGAGATCAGCTCTGTCAGTTTATCCCCAGTTGGAAAAGAAAATGATTGTATTACATCCAATTCATCTGAGGAGGAAGAGAAAGGATATTTAGCTTCAGTCCCATCAATTGCTGATTTGAAGACAGATCTGTCCCTGAAGGTCGAGTTGACATCCTTGAAAACTGAGAATTATACTAAAGATGCTGCCAACCTGTCACATGTCTCAAGCATTAAGCTTTTTGGAAGAACCGTCTCCTTGACAAATAATCAGAAGTCAGTTAACATAGAAGAGAAAATTAAGTCAGTTGTATGTAAGGAGAACCCTTGGTCAGTTGAGTCTGGATTTGACAATTCCTTACCATGCTGGAATTTTCACCTAAGTCTTTCAGATTTAGACCTTGGGCTGCGCAACAAAATTTTAAATCTTGCACCCCTTCATGCCTCCCTCAAAGAGAGAACAATTAAGAAGGAAAGTCATTGTATTGGTTCTAAAGCAGAATCAGTTAGTGAAATGGAAAATGGAGACAAGTTGGATGCTATAGTTTCTCAATGTGAATCATCCCTCAAATCTCCTCGAGGGTTTGTACCATATAAAAGATGTTTAGCTGAGAGAGACATGAATAATGAGTTTGTTGATGGATTTGAAGAGAGGAAGGGACAACGTACTCGAGTGTGCTCGTAG 1335 0.4045 MGRVSISNHMTSVTLKRLLLFTPAPDKIVRQESTMSNYCGIVSNRHPDGSTKSENVVCRKDITTTGDNFTPKARKPYTITKQREKWTEEEHLKFIEALKLYGRGWRQIEEHVGTKTAVQIRSHAQKFFSKVARESDGSTESSLKPIDIPPPRPKRKPLHPYPRKSADSFKGHSNESKRSPSPNLSATVKDTQSPTSVLSAFGSEAFGSAFSEQNNRCPSPNSCTNEISSVSLSPVGKENDCITSNSSEEEEKGYLASVPSIADLKTDLSLKVELTSLKTENYTKDAANLSHVSSIKLFGRTVSLTNNQKSVNIEEKIKSVVCKENPWSVESGFDNSLPCWNFHLSLSDLDLGLRNKILNLAPLHASLKERTIKKESHCIGSKAESVSEMENGDKLDAIVSQCESSLKSPRGFVPYKRCLAERDMNNEFVDGFEERKGQRTRVCS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1782 444 ProSiteProfiles Myb-like domain profile. 78 128 IPR001005 -
Lele08g1782 444 Gene3D - 85 132 - -
Lele08g1782 444 SUPERFAMILY Homeodomain-like 77 132 IPR009057 -
Lele08g1782 444 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 132 IPR017930 -
Lele08g1782 444 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 81 130 IPR006447 GO:0003677
Lele08g1782 444 PANTHER SWI/SNF COMPLEX-RELATED 53 318 - -
Lele08g1782 444 MobiDBLite consensus disorder prediction 130 192 - -
Lele08g1782 444 FunFam protein REVEILLE 6 isoform X1 85 133 - -
Lele08g1782 444 MobiDBLite consensus disorder prediction 149 174 - -
Lele08g1782 444 ProSiteProfiles SANT domain profile. 81 132 IPR017884 -
Lele08g1782 444 Pfam Myb-like DNA-binding domain 83 126 IPR001005 -
Lele08g1782 444 MobiDBLite consensus disorder prediction 175 192 - -
Lele08g1782 444 SMART sant 82 130 IPR001005 -
Lele08g1782 444 CDD SANT 85 128 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1782 Lele-ChrLele08 12249252 12251336 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele08g1782 Myb_DNA-binding 1.4e-13 CL0123