Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1778 ATGGAGTACGGGAGTGGAGGCGGTGGTGGGTCCCCCGGGGACCACCACCATGGTCACCACCACGACGGTTCTGATTCTCAGAGGAACAAGAAGCGATACCATCGTCATACCGCTAACCAGATTCAGAGGCTTGAATCAATGTTCAAGGAGTGCCCGCACCCGGATGAAAAGCAGAGATTACAGTTAAGCAGAGAACTATGCTTGGCCCCTAGGCAGATCAAGTTCTGGTTCCAGAACAGGAGGACCCAGATGAAGGCACAGCACGAGAGAGCCGATAACTGTGCCCTCCGAGCAGAGAACGACAAGATTCGATGCGAGAACATAGCTATCAGAGAGGCCCTCAAAAATGTCATTTGCCCTTCTTGTGGTGGCCCTCCTCTTCACGAGGATTCCTATTTCGACGAGCAAAAATTGCGATTTGAGAATGCTCAATTGAAAGAAGAGCTTGATAGAGTTTCTAGCATAGCGGCCAAGTACATTGGAAGACCGATTTCTCAACTTCCTCCGGTTCAGCCTATTCATATTTCGTCTCTGGACTTGTCAATGGGAAGTTTTGGGAGCCAAACGATGATGGGTGGTGGCCCTTCTCTTGATCTCGATCTTCTTCCGGGGAGTTCTTCGTCGGTTCCGAGCTTGCCGTATCAGGCGGCGGCTTTTTCCGACATCGATAAGTCCCTCATGTCGGACATTGCCGGTAACGCCATGGATGAGTTGCTGAGGCTTTTGCAAACTAATGAACCATTGTGGATGAAATCAAGCACTGATGGAAGAGATGTTCTTAATCTTGACGCTTACGGAAACGTGTTCCCTAGATCAAATAGTCACCTTAAGAACCCCAATGTTCGCGTCGAAGCTTCTCGAGATTCTGGTGTCGTCATTATGAATAGCTTGGCTTTGGTCGACATGTTCATGGACCCTGTAATCCCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTTGTCTGGGTTGTGA 969 0.4933 MEYGSGGGGGSPGDHHHGHHHDGSDSQRNKKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSRELCLAPRQIKFWFQNRRTQMKAQHERADNCALRAENDKIRCENIAIREALKNVICPSCGGPPLHEDSYFDEQKLRFENAQLKEELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMGSFGSQTMMGGGPSLDLDLLPGSSSSVPSLPYQAAAFSDIDKSLMSDIAGNAMDELLRLLQTNEPLWMKSSTDGRDVLNLDAYGNVFPRSNSHLKNPNVRVEASRDSGVVIMNSLALVDMFMDPVIPSSSSSSSSSLSGL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1778 322 ProSiteProfiles START domain profile. 220 305 IPR002913 GO:0008289
Lele08g1778 322 SUPERFAMILY Homeodomain-like 9 87 IPR009057 -
Lele08g1778 322 MobiDBLite consensus disorder prediction 13 29 - -
Lele08g1778 322 Pfam Homeodomain 30 85 IPR001356 GO:0003677
Lele08g1778 322 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 27 306 IPR042160 -
Lele08g1778 322 CDD homeodomain 30 88 IPR001356 GO:0003677
Lele08g1778 322 FunFam Homeobox-leucine zipper protein HDG1 17 103 - -
Lele08g1778 322 ProSitePatterns 'Homeobox' domain signature. 62 85 IPR017970 GO:0000981|GO:0006355
Lele08g1778 322 Gene3D - 15 101 - -
Lele08g1778 322 ProSiteProfiles 'Homeobox' domain profile. 27 87 IPR001356 GO:0003677
Lele08g1778 322 MobiDBLite consensus disorder prediction 1 36 - -
Lele08g1778 322 SMART HOX_1 29 91 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1778 Lele-ChrLele08 12212085 12213329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1778 25 307 Homeobox Transcription Factor Family AT1G73360 71.181 2.29e-139 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele08g1778 START 0.00021 CL0209