Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1776 ATGGCGGATTTGGAAAAAGATGAGTTCCCAATGCTGTTGGAGACAGAGGAACCATCAGTTGAATTTGTGGATTCTAATTTACGGAGGCTTGTATCCAGGACCCGAAGTGCATCAATGTCTATTCCTATGAGCTCCATGGAGCCACATGAGAGAGAAGCTAGTCTTGTGGGACATACTGGTCCACTAAGGAGTGAGAGGAAAAACCCCTTTGTGCAGATGAGTGGTCCACTATATGTCACCAAAGGACATGGAAATCTTTTCCGACAGAACGTCAATGCCACGGGGAACAAAGCAGTGGAGAGCAGTACAGAAAAATTTGCTTTGCATGGAAGAGATGGTAATGATTGGCAGACCAACTATGCCCACAAAAATGAACACTTACTGAGGTCTGGGCAATTGGGAATGTGTAATGATCCTTATTGTACAACTTGCCCTACTTACTTCAAGACCTCTCAGCTAAGGAACCCTAAGGCTTCTGGTTTATTTGATCCCAAGTTCCACAATGCTCTCTATGGAGATGCTAAGGGTTGTGCAAGAAGATTTATTTCTTCTGTGTCTTCTTGTGTCCCTGGAGTTATGAATCCTCATACTAAAGTTGTACAGCATTGGAACAAGTTTTTCGCCATTTCTTGCTTAGTGGCAATTTTTGTGGATCCATTATTTTTCTTTGTGCTCGGTGTAAACAAGGATGAAAGATGTATTTTCATAAACTGGAAGTTGACAGGAGCACTTGTTTTTGTTAGATCCATGAATGATTTTGTATACTTCCTAAACATGCTTCTTCAGTTTAGGTTGGCTTATGTGGCTCCTGACTCTAGGGTGGTTGGTGCTGGTGATTTAGTCGACCATCCAAAAAAAATTGCTCTTCATTATTTGAAGCGTTATTTTCTTATTGACTTATTTGTTGTATTTCCACTTCCTCAGATAATGATATTGTTTGCCCTACCATATCACTTGGGTTCATCAGGAGCAAACTATGCTAAGAATCTTCTACGTCTAGCCATCCTTGTTCAGTATATTCCCAGATTGAGGTTTCTGCCTCTTCTAATTGATCAGTCTCCTAGTGGATTCATATTTGAGTCAGCATGGGCAAATTTCTTTATAAATCTTCTCGCCTTTGTGCTATCTGGCCATGTTGTTGGGTCTTGCTGGTATCTCTTTGGTCTACAGAGGGTCAACCAATGTCTTCGAAATGCCTGCCATGGGGAGAAATTTGTTCACTGCGTGCAATTGATTGATTGTGGGCATGGTCATAGAGAAACCTATCCGTCTTCTCTTTTGTTCAACGAAAGTCAAAGTTGGTTACATAGTCCTGGTGCAGACATTTGTTTCCCAGTCTCAGAAGACGACAAAAGTTTTCCTTATGGGATCTATGCTAAAGCTGTTAACCTTGTCACAAAACCTAGTGTGGTCACGAGATATGTGTATTCACTATTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGGAATCAAGTCCCAAGCTATTTTGTCTGGGAAGTCCTTTTTACAATGGGCATCATAGGACTGGGACTCCTGCTTTTTGCTCTTCTCATTGGAAATATACAGAACTTTCTTCAGGCTCTTGGACGGAGGAGGCTAGAAATGTCACTTAGACGTCGTGATGTTGAGCAATGGATGAGCCACCGGCGCTTGCCAGAAGATTTAAGAAGTTCAGTTGTATGGTTCATTGCAAAACCTGCTTTCTTAGGTCTCTATCATTTTGTGTTTCGATATGCCTCATCATATTCTAATTATCTAAAACATGCACAGGTTCGAATTTTTGCCCTGATGGATGAACCTATCTTAGATGCCATTTGTGAGAGACTGAGACAAAAAACATACATCAAAGGAAGCAATATTCTGTATCATGGTGGTCTGGTAGACAAAATGGTGTTTGTTGTGCGTGGAAGATTGGAGAGCATTGGAGATGATGGGATCAGGGTTCCCTTAGTTGAAGGAGATGTGTGTGGTGAAGAACTCCTGACATGGTGTCTCGAACATTGTTCTGTGAACAGAGATGGTAAAAAAGTAAGGCTTCCTGGACAAAGATTGCTCAGCACCAGGACTGTACATTGCTTAACAAATGTGGAGGCATTTTCACTCCGATACGCAGACCTCGAAGAAGTCACTAGCCTTTTTACAAGATTCCTAAGAAACGCGCGGGTTCAAGGAGCCATAAGGTATGAATCGCCTTATTGGAGAAGCCTTGCAGCAACTCGCATTCAGGTTGCATGGAGATACAGGAAGAAACGTCTCAGTCGTGCTGATACCTCACAGGCAAATCTTTAG 2292 0.4215 MADLEKDEFPMLLETEEPSVEFVDSNLRRLVSRTRSASMSIPMSSMEPHEREASLVGHTGPLRSERKNPFVQMSGPLYVTKGHGNLFRQNVNATGNKAVESSTEKFALHGRDGNDWQTNYAHKNEHLLRSGQLGMCNDPYCTTCPTYFKTSQLRNPKASGLFDPKFHNALYGDAKGCARRFISSVSSCVPGVMNPHTKVVQHWNKFFAISCLVAIFVDPLFFFVLGVNKDERCIFINWKLTGALVFVRSMNDFVYFLNMLLQFRLAYVAPDSRVVGAGDLVDHPKKIALHYLKRYFLIDLFVVFPLPQIMILFALPYHLGSSGANYAKNLLRLAILVQYIPRLRFLPLLIDQSPSGFIFESAWANFFINLLAFVLSGHVVGSCWYLFGLQRVNQCLRNACHGEKFVHCVQLIDCGHGHRETYPSSLLFNESQSWLHSPGADICFPVSEDDKSFPYGIYAKAVNLVTKPSVVTRYVYSLFWGFQQISTLAGNQVPSYFVWEVLFTMGIIGLGLLLFALLIGNIQNFLQALGRRRLEMSLRRRDVEQWMSHRRLPEDLRSSVVWFIAKPAFLGLYHFVFRYASSYSNYLKHAQVRIFALMDEPILDAICERLRQKTYIKGSNILYHGGLVDKMVFVVRGRLESIGDDGIRVPLVEGDVCGEELLTWCLEHCSVNRDGKKVRLPGQRLLSTRTVHCLTNVEAFSLRYADLEEVTSLFTRFLRNARVQGAIRYESPYWRSLAATRIQVAWRYRKKRLSRADTSQANL 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1776 763 SUPERFAMILY Voltage-gated potassium channels 195 532 - -
Lele08g1776 763 SUPERFAMILY cAMP-binding domain-like 591 719 IPR018490 -
Lele08g1776 763 Gene3D Jelly Rolls 592 716 IPR014710 -
Lele08g1776 763 CDD CAP_ED 594 710 IPR000595 -
Lele08g1776 763 Gene3D - 207 529 - -
Lele08g1776 763 ProSiteProfiles cAMP/cGMP binding motif profile. 594 662 IPR000595 -
Lele08g1776 763 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 136 756 - -
Lele08g1776 763 Pfam Ion transport protein 203 532 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele08g1776 763 SMART cnmp_10 594 726 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1776 Lele-ChrLele08 12170587 12178139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1776 5 672 Ion Channels AT3G17700 58.540 0.0 741