Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1771 ATGTGCAGTAGAGGCCATTGGAGGCCAGCCGAGGATGAGAAACTTCAAGAATTGGTGGAGCGTTATGGAGCCCATAACTGGAACGCCATAGCTGAAAAGCTTCGAGGAAGATCAGGGAAGAGCTGCAGGTTGAGGTGGTTCAATCAACTGGACCCAAGAATAAACCGGAGTCCATTTACAGAGGAAGAAGAAGAAAGGCTTGTGGCATGCCACAGGATGCATGGGAACAGATGGGCAGTGATAGCGAGGCATTTTCCAGGAAGAACTGATAATTCTGTGAAGAATCACTGGCACGTTATGATGGCCAGAATTCGCCGTGAAAGCTTCAAGCTCTCTGCGAAACGCCCTCATCTTCATCAACAGTGTTCTTCGCCCCCACCAATAATATCATCAGATCCTACTACTAATAATAGTATTGTTGTTCCTTCTTTCGTTGAGAAATACTATGACAAGCATGCCTTCCCTGCTTATTGTCTCCCTTATAACCCTTTCCTCCTTCATTTCCCCAACAATAAGTTTCTTCATCTTCAACTTCCAACTCGCTCTTCTTCAGTACTTCATGATAAAAGTGAATCGATTGAGTTCTACGACTTTCTGCAAGTGAACACAGATTCTAATAATAGAAGCGAGGTGACAGACATTGCCAGAAGAGAAGACGAGGAAGTGAATCAAGATAATGTGGGAGGAGGAGGAGGACAACAGAACAAAGATGGTGATGGTGTTCCGTTTATCGATTTTTTGTCTGTTAATGGAAGAAGCTCCTAA 765 0.4418 MCSRGHWRPAEDEKLQELVERYGAHNWNAIAEKLRGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLVACHRMHGNRWAVIARHFPGRTDNSVKNHWHVMMARIRRESFKLSAKRPHLHQQCSSPPPIISSDPTTNNSIVVPSFVEKYYDKHAFPAYCLPYNPFLLHFPNNKFLHLQLPTRSSSVLHDKSESIEFYDFLQVNTDSNNRSEVTDIARREDEEVNQDNVGGGGGQQNKDGDGVPFIDFLSVNGRSS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1771 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Lele08g1771 254 SMART sant 3 52 IPR001005 -
Lele08g1771 254 SMART sant 55 103 IPR001005 -
Lele08g1771 254 PANTHER MYB PROTEIN-RELATED 4 138 - -
Lele08g1771 254 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Lele08g1771 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
Lele08g1771 254 Pfam Myb-like DNA-binding domain 4 50 IPR001005 -
Lele08g1771 254 Pfam Myb-like DNA-binding domain 56 99 IPR001005 -
Lele08g1771 254 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
Lele08g1771 254 CDD SANT 58 101 IPR001005 -
Lele08g1771 254 CDD SANT 7 48 IPR001005 -
Lele08g1771 254 Gene3D - 57 122 - -
Lele08g1771 254 MobiDBLite consensus disorder prediction 215 242 - -
Lele08g1771 254 FunFam MYB transcription factor 4 55 - -
Lele08g1771 254 Gene3D - 4 55 - -
Lele08g1771 254 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1771 Lele-ChrLele08 12119728 12121387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1771 1 254 MYB Transcription Factor Family AT1G17950 50.000 1.35e-76 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele08g1771 Myb_DNA-binding 2.9e-15 CL0123