LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele08g1751	ATGCCTGATCTTTCTCTTCACATAAGCCTCCCGAACAGTGCTCCTTCTTCAATTTGCACTGCAAATTATAATAACGAAGAAGCAGATTCGTCGTTTGATATTTGGAGAAGCAGCAACACAGAAGAAGTAGATGGCGTCGTCATCAAATCCTACAGTGAGAGTTCAATCAGAGGTAGCCCTCATCATCAAGAACAACAAACCCATCATGATGTCTCTCTCTTCAATCATCATCATCTTCTCACAAGTACTACTGGTTCAGAGGCTGAGAGCCCCTGGAGGAGGAGGACGACAACGACGGCGACGGCGACCACAAACGCCGCCGCTGGTGAAGATGGTGGGTTCTGGGTTTCAGAGGGACTCAATTCAAGAATCACCAGAGGAATCCTCCCACTTCAGGATTCCAATAATATTTCTGTATACCCACTTCATCATCATCAACAATTTCCCTTTCCTAATAATTACTCAGCTTCTTCTTATCATCCTAGTTTTAGGCCCTGCGATAATAACCCAATCTCGAGGTTTAATGGGATAAGCATGGAGAGTTTGATAAGACCTCATCAACCCAATCATCATCAGTTTCATTACTTAAATCATCATCAGTTAATTGGTTCAAACCCAGATTTCTCAAACGGATTTGGGAGGTCGTCGTCCAAGATGTTGCCTAATAGGATTCACAGTAATAAGAGGAACATGAGGGCTCCCAGAATGCGTTGGACTAGCACTCTTCATGCTCGTTTCGTTCACGCCGTTGAGCTCCTCGGCGGCCATGAAAGTATTAATTTCTCTCTTCATTCCCTCTTATGTTTTTTGGAGCTCATGGATGTGAAAGATCTAACACTTGCTCATGTGAAGAGCCATTTGCAGATGTATCGAACTGTTAAGAACACTGACAAACCTGCAGCTTCCTCAGATGGAGATGAAGATTTCATGAGCCTAACACCACCTCTAAATGGAAATGAGAACTATTTTTCACCCAACAAGAGAGGCCCTACAAATGCATCATCTGTAGATCAGGACATGGCCTACACTAGCACCAATCTGTGGGGTAATTCTTCTAGGTAA	1062	0.4369	MPDLSLHISLPNSAPSSICTANYNNEEADSSFDIWRSSNTEEVDGVVIKSYSESSIRGSPHHQEQQTHHDVSLFNHHHLLTSTTGSEAESPWRRRTTTTATATTNAAAGEDGGFWVSEGLNSRITRGILPLQDSNNISVYPLHHHQQFPFPNNYSASSYHPSFRPCDNNPISRFNGISMESLIRPHQPNHHQFHYLNHHQLIGSNPDFSNGFGRSSSKMLPNRIHSNKRNMRAPRMRWTSTLHARFVHAVELLGGHESINFSLHSLLCFLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDEDFMSLTPPLNGNENYFSPNKRGPTNASSVDQDMAYTSTNLWGNSSR	353

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele08g1751	353	TIGRFAM	myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class	234	292	IPR006447	GO:0003677
	Lele08g1751	353	PANTHER	TRANSCRIPTION FACTOR KAN2-RELATED	1	352	IPR044847	GO:0000976\|GO:0006355\|GO:0010158
	Lele08g1751	353	MobiDBLite	consensus disorder prediction	314	339	-	-
	Lele08g1751	353	Gene3D	-	233	295	-	-
	Lele08g1751	353	MobiDBLite	consensus disorder prediction	296	339	-	-
	Lele08g1751	353	MobiDBLite	consensus disorder prediction	82	105	-	-
	Lele08g1751	353	SUPERFAMILY	Homeodomain-like	231	293	IPR009057	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele08g1751	Lele-ChrLele08	11939367	11941590	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele08g1751	213	353	G2-like Transcription Factor Family	AT5G16560	57.241	4.53e-37	136

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GARP-G2-like	Lele08g1751		None	None	None