Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1743 ATGGCCCTCGTCCGCGATCGCCGCCACCTAAACCTCCGCCTCCCGCTGCCCGAACCCTCCCAGCGCCGACCTCGCTTCCCGCTCCCCCTTCCACCCTCATCCAATCCTTCCAACAACTCCGTCGCCGCCGATATCGCCCCTAACGACCTCGAAAAGCTTCAGGTCCTCGGCCACGGCAACGGAGGCACCGTTTATAAGGTCCGTCACAAGCGCACCTCCGTCGTCTACGCTCTCAAGGTCGTCCACAGCGATTCCGATCCCATGACCCGCCGCCAAGTTCAGAGGGAAATGGATATCCTCCGCCGGGCGGACTCGCCTTACGTCGTGCGCTGTCACGGGTTCTTCGATAAACCTTCTGGAGATGTGGCGATTGTTATGGAGTATATGGATTCAGGAACGCTGGACACTTTGTTCAAAAAGAACGGCACGTTTTCGGAAGGCCAACTCGCGGCGGTGGCACGTCAGGTTTTAAACGGGTTGAGCTATCTCCACTCGCACAAGATTGTCCACCGCGATATTAAGCCCTCTAATCTCTTGGTGAATCAGAAAATGGACGTGAAAATCGGCGATTTCGGAGTCAGCAAGATCATGTGCCGCACACTGGACGCGTGCAATTCATACGTCGGGACCTGCGCGTACATGAGCCCGGAACGATTCGACCCGGATAGGTACGGCGGGAATTATAACGGGTATTCGGGTGACATATGGAGCCTGGGTCTGACCCTGTTCGATCTGTACGTGGGTCACTTCCCGTTTCTGCCGGCGGGTCAGAGACCCGATTGGGCGACCCTGATGTGTTCGATTTGCTTCGGAGACCCGCCGAGCTTGCCGGAGCGGGCCTCAAGAGAGTTTCGGAGCTTCATAGATTGTTGCCTGAAGAAGGAATCGAGTGAGAGGTGGGGTGCCTCTCAGCTTTTGAGTCATCCGTTTCTTTCGAAGAAGTCGGGGAATTGTTAG 957 0.5664 MALVRDRRHLNLRLPLPEPSQRRPRFPLPLPPSSNPSNNSVAADIAPNDLEKLQVLGHGNGGTVYKVRHKRTSVVYALKVVHSDSDPMTRRQVQREMDILRRADSPYVVRCHGFFDKPSGDVAIVMEYMDSGTLDTLFKKNGTFSEGQLAAVARQVLNGLSYLHSHKIVHRDIKPSNLLVNQKMDVKIGDFGVSKIMCRTLDACNSYVGTCAYMSPERFDPDRYGGNYNGYSGDIWSLGLTLFDLYVGHFPFLPAGQRPDWATLMCSICFGDPPSLPERASREFRSFIDCCLKKESSERWGASQLLSHPFLSKKSGNC 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1743 318 FunFam Mitogen-activated protein kinase kinase 1 32 130 - -
Lele08g1743 318 MobiDBLite consensus disorder prediction 20 34 - -
Lele08g1743 318 Pfam Protein kinase domain 51 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1743 318 Gene3D Phosphorylase Kinase; domain 1 33 125 - -
Lele08g1743 318 MobiDBLite consensus disorder prediction 13 43 - -
Lele08g1743 318 SUPERFAMILY Protein kinase-like (PK-like) 46 312 IPR011009 -
Lele08g1743 318 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 36 313 - -
Lele08g1743 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Lele08g1743 318 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Lele08g1743 318 Gene3D Transferase(Phosphotransferase) domain 1 126 317 - -
Lele08g1743 318 FunFam Mitogen-activated protein kinase 2 131 318 - -
Lele08g1743 318 ProSiteProfiles Protein kinase domain profile. 50 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1743 318 CDD PKc_MAPKK_plant_like 48 313 - -
Lele08g1743 318 SMART serkin_6 50 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1743 Lele-ChrLele08 11859112 11860068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1743 1 313 MAP Kinase Kinase Gene Family AT1G73500 62.420 1.33e-138 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lele08g1743 Pkinase 2.9e-65 CL0016