Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1740 ATGGATATGGAATCTGAGAGGCTTCACAGTGCTGAGAAAAATGAACCAGCTTCAGAAAAGGACGACGTCCTCAAGAGAAGAATCTCTAACCACCCTCTCTATGAACTCCTTGTTCAAGCTCACTTGCAGTGTTTGAAGGTTGGTGAAATTTCCAACTTGGAGAGAGAGCAGGAGGAGATAGATCAGAAGCTAACAACGAACAGCCAAAGCTTGGATATGTTCAATGAGCCAGAGCTTGATCTCTTCATGGAAGCATATTGCATGGCACTGGGGAAGCTGAAGGAAGCAATGGAGGAACCACAACAAAAGGTGATGGCTTTCATAAACAATATGCAGTCACAACTGAAGGAGCTCACTGTTCATCAGCCACCTGATGCGTCTCCCACAACTTCTTCTTCAAAATGA 405 0.4469 MDMESERLHSAEKNEPASEKDDVLKRRISNHPLYELLVQAHLQCLKVGEISNLEREQEEIDQKLTTNSQSLDMFNEPELDLFMEAYCMALGKLKEAMEEPQQKVMAFINNMQSQLKELTVHQPPDASPTTSSSK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1740 134 SMART KNOX1_2 22 69 IPR005540 GO:0003677|GO:0005634
Lele08g1740 134 SMART KNOX2_2 69 120 IPR005541 GO:0003677|GO:0005634
Lele08g1740 134 MobiDBLite consensus disorder prediction 1 24 - -
Lele08g1740 134 Pfam KNOX1 domain 24 48 IPR005540 GO:0003677|GO:0005634
Lele08g1740 134 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 10 121 - -
Lele08g1740 134 Pfam KNOX2 domain 75 119 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1740 Lele-ChrLele08 11848569 11849756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1740 22 118 Homeobox Transcription Factor Family AT4G08150 38.835 4.72e-14 65.9