LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele08g1739	ATGGATTATCAGCTGCATCCTGATGCATATTTTGATGGGGTTAAGAAAAAAACATGGAAGCAAACTATTCTCCTGTCTTCTCAAATCATTGGAGTAGTTTATGGTCAAATAAGCACTGCCCCATTATATGTTTTTGGGACTATGCATACAGGGGATGTGATTTCAGAGGAGGTTGTTTACGAAATCTTCTCATTCATATTCTGGACTCTAACTGTCATTTCCTTGCTGAAGTATGCCTTTATAATGCTGAAAGTTGATAATGATGGAGAAGGTGGCACTTTCGCGTTATACTCACTCTTGTGTAGACACGCGAAAGTTGGCCTGCTCCCGAGTGATAGAAGCACCGATGAAGTTATGCTTTATGAGGAGAAGAGTCCCTCTAACAGGAATGCGGATTCAAGGGCTCGAAGGGCCATCGAGAAGCACAAAAGCTGTCACTATTTGCTATTGTCATTGGCTCTCTTCGGATCCTGTATGACTATCGGTGATGGCGTGCTCACTCCAGCACTTTCTGCCTTATCAGCTTCAAAGGGTTTTGTCTGGTCCTTGACAGATTTGTCACACATATTTTCCTCTTCACAACATTCTCGGTATTCGGTGGCAGAGGGTATTAAGAGATATGTACCTGTTCCCTCAGCATGTGCTATATTGGTTGGCCTTTTCGTGCTGCAGCCGTTTGGGACGCGCAAAATCGGATTCATGTTTGCTCCGATAATTTTTGTTTGGCTGTTATTTATTGCTGGAGTAGGACTGTACAATATTATCCAATGGGATGTGGAAATCATTTATAAAATATCCCCACTATGCATGTTCAAATTCGTCAGAAATAATCTACACAGATGGAGGTTGCTCGGGAGCGTCATTTTATGTGTAGCAGGCTCAGAGGCTATGTTTGCTGATCTAGGCCATTTCTCCAAGAAATCAATTAAGATAACATTCATCTGCTTTATCTACCCACTTCTTGTTTTAAGCTACGCGGGCCAGGCGGCGTATATCTCTAAGAACTTGAACACTGAAGACTTCATTCATCTTAGTGGATCTATGCCTAAACACTGCAATCATATTTTCACAATATTGTCCCTATTTGCTTCTGCTGTTGGAAGCCAAGCGACGATAACGGCCACTTTTTCCATAATTAATCAGTGCCTGGCTCTGAATTGCTTCCCCAGAGTAAAAGTTATTCACACATCAAAGAAGATACATGGACAGATTTACATCCCAGATATCAACTGGATATTGATGATTCTCAGTCTCACTGTCACTATTGGTTTCCAAGACATGGTGAAAATCGGTAATGCGACAGCTTTGGCTATAATCAGTGGAATGCTGGTGACAACTAGTCTGATGTCACTCATCATTGCTCTGTATTGGGAGAAGAACTTGTTTTTCTCTGCATGCTTTCTGTTTTGTTTTGGCTCTCTTGAGGCTGCATATCTTTCAGCATGTTTGCTACAATTTCACAAGGGAGCATGGTATCTATTTGTTCTCTTGGTGGTGACCATGACAATCATGATTGCTTGGCATTATGGAACTATGAAGAAGTATGAGTTTGATATAGAAAACAAGGTGTCCACTGAATGGCTCATAGATGTTAGTCCAAACCTCAGCATTTCAAGAGTACCGGGCATTGGCTTCATTTACACCGACATCGTAGCAGGAATCCCGGCTTTCTTCTCGCATTTCATCACTAATCTTCCTGCGTTTCATCAAGTTCTTATACTAGTGTCCTTCAAGTCTCTACCTGTGCCTTATGTCCCAGAAAGTGAGAGATATCTCATAGGCAGGATTGGTCCAAAAGATTACAAAATTTACCGATGCATTGTCAGATATGGATATTGTGATCATGTTAGGGACACGGATGATTTCGAGGAGCAGATAATCCGTTCTATTGGAGAATTCATCAATGTTGACAAGAGTGACATTGAATCCATGGATTCCCCACATAGAAGGATGATCATCATTGGTAGTTCATCATCATCACATGGAAATGCTTTAGTTCCTCTAGAGGATCTTGAATCAACCGAGGGACCGAGCCTAGCGAGCAACGAATCTCAGATAAGTCCAGTTGCTAGTCCTCCTCCTTCTGCTAAGAGAAAAAAGGTCAGATTCATGTTGCCTGCAAATAGTCCTAAAATGCAGGCACCAGTGAGGAAGGAGCTGTTAGAGCTAATTGATGCTCGGGAAAGCGGTAGCGCCTATTTCCTGGGCCAATCTCATTTAGTGGTTCGCGATGGATCAAACATTCTAAAGAGATTCCTAATCATGACATACCATTTAAGCGAAAAGAATTGTCGCGAGCCTCCAGTGGCACTCAAGATTCCTCATGCTGCTCTTGTAGAAGTTGGTATGATCTGTACTATATAA	2364	0.4201	MDYQLHPDAYFDGVKKKTWKQTILLSSQIIGVVYGQISTAPLYVFGTMHTGDVISEEVVYEIFSFIFWTLTVISLLKYAFIMLKVDNDGEGGTFALYSLLCRHAKVGLLPSDRSTDEVMLYEEKSPSNRNADSRARRAIEKHKSCHYLLLSLALFGSCMTIGDGVLTPALSALSASKGFVWSLTDLSHIFSSSQHSRYSVAEGIKRYVPVPSACAILVGLFVLQPFGTRKIGFMFAPIIFVWLLFIAGVGLYNIIQWDVEIIYKISPLCMFKFVRNNLHRWRLLGSVILCVAGSEAMFADLGHFSKKSIKITFICFIYPLLVLSYAGQAAYISKNLNTEDFIHLSGSMPKHCNHIFTILSLFASAVGSQATITATFSIINQCLALNCFPRVKVIHTSKKIHGQIYIPDINWILMILSLTVTIGFQDMVKIGNATALAIISGMLVTTSLMSLIIALYWEKNLFFSACFLFCFGSLEAAYLSACLLQFHKGAWYLFVLLVVTMTIMIAWHYGTMKKYEFDIENKVSTEWLIDVSPNLSISRVPGIGFIYTDIVAGIPAFFSHFITNLPAFHQVLILVSFKSLPVPYVPESERYLIGRIGPKDYKIYRCIVRYGYCDHVRDTDDFEEQIIRSIGEFINVDKSDIESMDSPHRRMIIIGSSSSSHGNALVPLEDLESTEGPSLASNESQISPVASPPPSAKRKKVRFMLPANSPKMQAPVRKELLELIDARESGSAYFLGQSHLVVRDGSNILKRFLIMTYHLSEKNCREPPVALKIPHAALVEVGMICTI	787

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele08g1739	787	MobiDBLite	consensus disorder prediction	675	691	-	-
	Lele08g1739	787	MobiDBLite	consensus disorder prediction	674	697	-	-
	Lele08g1739	787	TIGRFAM	kup: potassium uptake protein	27	787	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele08g1739	787	Pfam	K+ potassium transporter	28	613	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele08g1739	787	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	16	785	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele08g1739	Lele-ChrLele08	11839716	11844060	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele08g1739	15	784	Inorganic Solute Cotransporters	AT2G40540	47.229	0.0	732