Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1731 ATGCATTCAATCCACAGTCCCTCTTTCTATGCTAACCTCAACCATTCTCTATTCAAGTTCAATCAAATTTCCAACTGTTTGGTTGGATCCAATGTGCCACTGGCCTCCTGCGCGCCACCGGCTGTTCGTAGCTTCGGATTGCGTGCTATTGATTCTGAGTTCTTGCCCAAAATTGGTTATTTTCAGAACCCAAGGCTTTTTTTCGCGCGCAGGAAAACCTGGCGCTGTGTAGTAGCCGGAGCCACCGGAACTGACTACTATTCGACTTTGAAAGTTAGTAAGAATGCTTCTTTGCAAGAGATTAAGAGCGGTTACAGAAAACTAGCCCGTAAGTATCATCCAGATATGAACAAGAGCCCCGGGGCAGAAGAGAAGTTCAAGGAGATAAGTGCTGCATATGAGGTTCTATCAGATGATGAGAAAAGATCTATATATGATCGCTTTGGTGAGGCAGGTCTACAAGGAGAAAATGGAGGGCCAGCTAGTGCTTCAGGGGTTGATCCTTTTGATGTATTTGATGCCTTCTTTGGTGGTTCGGATGGTCTATTTGGAGGTGGTGATGGACCAGGAGGAATGAACTTCAATTTGGGAAGCAACAGAAAACTTAGTCTTGATATTCGGTATGACCTTTACTTGAGCTTTGAGGAATCTATTTTTGGAGGAAGGAAAGAAATCGAAGTTCCTTGTTTTCAGACATGTAATGATTGTGATGGTACAGGAGCTAAATCAAGGGATTGCATTAAACCATGCATAAATTGTGGTGGCAGAGGAGGAGAGATGAAAAGTCAAAGAACACCCTTTGGAGTGATGTCTCAGGTCATAACCTGCTCTAACTGCCGTGGTCTTGGCAAGATAGTCACTGATAACTGTCAAAGGTGCAGTGGCAGTGGGATGGTGCAGTCTAAACAAACAATGGAAATGGTCATTCCTCCTGGTGTCATTGACGGAGCCACAATGCAAATTCGAGGAGAAGGGAATTTTGATAAGAATAGGGGTACAGCTGGTGACCTTTATATAGTCATCCATGTAGATGAAAAAGATGGAGTTTGGAGGGAAGGTCTTCATTTGTACTCAAAGATTAATATTGACTTCACAGAGGCAATTCTAGGGTCTGTTAAAAAGGTAGAAACTGTTGAGGGTTTAAGGGATCTCCAAATTCCTTCTGGGATTCAACCAGGAGATTCCGTGAAGTTGTCACATATGGGAGTTCCTGACATGAATAAACCATCTGTTCGAGGTGATCATCACTTCATTGTGAATGTTCTCATCCCTAAAAGTATCAGTGTTGCTGAACGTGTACTTGTTGAGGAATTGGCTTCACTCAGAGCATCTGGCAAAGACACCTCATTTTCTTCTAACAAAGTTGGGACACCTAAAGGTGGAGTAAAAGACTTCAAAAAGAGGCACCGAAAACGCCATTCAAGAATGGGAAGCAAACATGGTTCTCTATGGAGATCAATCAAGAATTTCTTAAGGGGAGGACAATCTGAAGAGAAGTTTGCATCTATTAGTTTGGATTCCTCAGCAGCATTGTGGAGATTTGGCAAGTCAAGCTCATCAAACCCTAATTATTTTGCATTTGGTTTCATTACAAGTTGTATTATTTTCTATATATCTAGGTCTTGTCATGCTTTGTTTGAAAAACGAACCCTGCCCTCTACTCATAGAACACCTAGTTGA 1680 0.4226 MHSIHSPSFYANLNHSLFKFNQISNCLVGSNVPLASCAPPAVRSFGLRAIDSEFLPKIGYFQNPRLFFARRKTWRCVVAGATGTDYYSTLKVSKNASLQEIKSGYRKLARKYHPDMNKSPGAEEKFKEISAAYEVLSDDEKRSIYDRFGEAGLQGENGGPASASGVDPFDVFDAFFGGSDGLFGGGDGPGGMNFNLGSNRKLSLDIRYDLYLSFEESIFGGRKEIEVPCFQTCNDCDGTGAKSRDCIKPCINCGGRGGEMKSQRTPFGVMSQVITCSNCRGLGKIVTDNCQRCSGSGMVQSKQTMEMVIPPGVIDGATMQIRGEGNFDKNRGTAGDLYIVIHVDEKDGVWREGLHLYSKINIDFTEAILGSVKKVETVEGLRDLQIPSGIQPGDSVKLSHMGVPDMNKPSVRGDHHFIVNVLIPKSISVAERVLVEELASLRASGKDTSFSSNKVGTPKGGVKDFKKRHRKRHSRMGSKHGSLWRSIKNFLRGGQSEEKFASISLDSSAALWRFGKSSSSNPNYFAFGFITSCIIFYISRSCHALFEKRTLPSTHRTPS 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1731 559 SUPERFAMILY Chaperone J-domain 83 191 IPR036869 -
Lele08g1731 559 CDD DnaJ_zf 233 297 IPR001305 GO:0031072|GO:0051082
Lele08g1731 559 Pfam DnaJ central domain 233 297 IPR001305 GO:0031072|GO:0051082
Lele08g1731 559 FunFam Molecular chaperone DnaJ 225 302 - -
Lele08g1731 559 Pfam DnaJ C terminal domain 206 424 IPR002939 -
Lele08g1731 559 SMART dnaj_3 84 141 IPR001623 -
Lele08g1731 559 MobiDBLite consensus disorder prediction 449 478 - -
Lele08g1731 559 Hamap Chaperone protein DnaJ [dnaJ]. 82 465 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lele08g1731 559 ProSiteProfiles dnaJ domain profile. 85 149 IPR001623 -
Lele08g1731 559 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 220 300 IPR036410 -
Lele08g1731 559 ProSitePatterns Nt-dnaJ domain signature. 126 145 IPR018253 -
Lele08g1731 559 Gene3D - 233 297 - -
Lele08g1731 559 SUPERFAMILY HSP40/DnaJ peptide-binding domain 351 432 IPR008971 GO:0006457|GO:0051082
Lele08g1731 559 FunFam Chaperone protein dnaJ A6 chloroplastic 82 188 - -
Lele08g1731 559 CDD DnaJ_C 205 427 - -
Lele08g1731 559 CDD DnaJ 85 138 IPR001623 -
Lele08g1731 559 Gene3D - 350 441 - -
Lele08g1731 559 Gene3D - 205 339 - -
Lele08g1731 559 ProSiteProfiles Zinc finger CR-type profile. 220 302 IPR001305 GO:0031072|GO:0051082
Lele08g1731 559 Pfam DnaJ domain 85 146 IPR001623 -
Lele08g1731 559 Gene3D DnaJ domain 82 184 IPR036869 -
Lele08g1731 559 MobiDBLite consensus disorder prediction 463 478 - -
Lele08g1731 559 SUPERFAMILY HSP40/DnaJ peptide-binding domain 205 343 IPR008971 GO:0006457|GO:0051082
Lele08g1731 559 PRINTS DnaJ domain signature 121 141 IPR001623 -
Lele08g1731 559 PRINTS DnaJ domain signature 141 160 IPR001623 -
Lele08g1731 559 PRINTS DnaJ domain signature 87 105 IPR001623 -
Lele08g1731 559 PRINTS DnaJ domain signature 105 120 IPR001623 -
Lele08g1731 559 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 48 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1731 Lele-ChrLele08 11770806 11777022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1731 86 146 C2H2 Transcription Factor Family AT1G74250 44.776 1.61e-07 52.4