Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1729 ATGGCGCCTCACAAGCTCTCTCTGTTGCTCCCCATCTTCCTCATTTTGCTTCCTCTGGTGAGACCAGATCTGGCTTCTGAGCGAGCTGCTCTGCTCGCTCTCCGTTCCTCTGTGGGAGGCCGAACCCTTCTCTGGAACGTCACCCAACAGAGTCACTGCACGTGGGCTGGCGTCCAATGCGTCCGTGACCAGGTCGTCGAGCTTCATCTTCCCGGTGTTGGGCTTTCTGGCAAGCTACCTAACGGCATTTTCGGTAACCTCACTCATCTCCAGACTCTCAGTCTGCGTTTCAACGCCTTGACTGGAAGTCTTCCTTCAGATCTCGCTTCTTGTGTCCACCTTCGGAATCTTTACTTGCAGCGAAACTTGCTCTCTGGAGAAATCCCTGAATTCTTGTTCTCTTTACCTGACATGGTTCGCCTTAATTTAGCGCACAACAATTTTTCCGGTGTGATTCCACTGGAGTTCAACAAGTTGGTAAGGCTGAGGACTCTGTATCTCGAGAATAATCAGTTTTCAGGTTCCATTCCCGGGTTGAACCTGGCAAATCTCGAGCAGTTCAATGTGTCGAACAATTTGTTAAACGGCTCGGTGCCGGTAAAGCTACAGACATTTTCTGAAGATTCATTTCTCGGAAATTCACTGTGCGGGAAGCCACTCAAGCTTTGCCCAGGAGAAGGAGCCGCAATATCTCCGTCGGGCGAGATTGAGAACAGCAATAACGGAGGGAAGAAGAAGAAATTGTCTGGTGGGGCCATTGCTGGAATAGTCATTGGATCTGTGGTGCTTCTCCTGTTGATTGTGTTCGCTTTGATTCTTCTTTGCCGAAAGAAGAGTAGTAAGGACTCGAGATCCATCGACATTGCAACAATGAAGCATCCAGAAACAGAAATTCCAGGCGACAAACCCGTTTCAGATGTGGAGAATAATAATAATGGTCATGGTAATGTGTATTCGGTGGCTGCAGTAGCTGCAGCGGCCATGACAGGAAACGGTAGAACAGAATCGAACAGCAATGACGGTGCGAAGAAGTTGTCATTCTTTGGTAATTCACCGAGGGTGTTTGATCTGGAAGATTTACTTAGAGCTTCGGCGGAGGTTTTGGGTAAAGGAACGTTTGGAACGGCGTATAAGGCGGTTCTGGAGTCTGGTCCGGTGGTGGCTGTGAAGAGGTTGAAGGATGTGACAATTTCTGAAAAGGAATTCAAGGAGAAGATTGAATTGGTGGGAGCAATGGATCATGAGAAATTGGTCCCTCTCAGAGCTTATTATTTCAGCAGGGATGAAAAACTTCTTGTCTATGATTACATGCCAACGGGAAGCTTATCTGCACTTTTGCACGGAAACAAAGGGGCGGGTAGGACACCATTGAATTGGGAAATCAGATCAGGAATTGCACTAGGAGCTGCTCAGGGCATCGAGTACCTACATTCACAGGGACCTAATGTTTCTCATGGAAACATAAAATCATCCAACATCCTCCTCACAAAATCCTATGATGCCAGAGTGTCTGATTTTGGCCTGGCACATCTTGTTGGCCCCTCCTCCACTCCCAATCGGGTTGCTGGCTACCGTGCGCCGGAAGTTACTGATCCTCGCAAAGTTTCTCAGAAAGCAGATGTCTACAGCTTTGGAGTGTTGCTCTTGGAACTTCTGACTGGAAAGGCTCCCACACATTCTCTCTTAAATGAGGAAGGAGTAGACCTCCCAAGATGGGTTCAATCTGTTGTTAGAGAAGAATGGACTTCTGAAGTGTTTGATCTTGAGCTCCTAAGGTATCAGAATGTTGAGGAGGAGATGGTTCAATTATTGCAGCTTGCAGTAGATTGTGCAGCTCAATATCCTGATAAGCGCCCTTCAATGTCTGAGGTGAGACAACGCATAGAGGAGCTACGTCGCTCAAGCTTGAAAGAGGATCAAGACCAAATTCAGCAGCCTGATCTGATCAATATGATGTAG 1959 0.4758 MAPHKLSLLLPIFLILLPLVRPDLASERAALLALRSSVGGRTLLWNVTQQSHCTWAGVQCVRDQVVELHLPGVGLSGKLPNGIFGNLTHLQTLSLRFNALTGSLPSDLASCVHLRNLYLQRNLLSGEIPEFLFSLPDMVRLNLAHNNFSGVIPLEFNKLVRLRTLYLENNQFSGSIPGLNLANLEQFNVSNNLLNGSVPVKLQTFSEDSFLGNSLCGKPLKLCPGEGAAISPSGEIENSNNGGKKKKLSGGAIAGIVIGSVVLLLLIVFALILLCRKKSSKDSRSIDIATMKHPETEIPGDKPVSDVENNNNGHGNVYSVAAVAAAAMTGNGRTESNSNDGAKKLSFFGNSPRVFDLEDLLRASAEVLGKGTFGTAYKAVLESGPVVAVKRLKDVTISEKEFKEKIELVGAMDHEKLVPLRAYYFSRDEKLLVYDYMPTGSLSALLHGNKGAGRTPLNWEIRSGIALGAAQGIEYLHSQGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPSMSEVRQRIEELRRSSLKEDQDQIQQPDLINMM 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1729 652 FunFam Probable inactive receptor kinase RLK902 24 180 - -
Lele08g1729 652 Gene3D Ribonuclease Inhibitor 179 226 IPR032675 -
Lele08g1729 652 Gene3D Phosphorylase Kinase; domain 1 327 436 - -
Lele08g1729 652 Pfam Leucine rich repeat 78 124 IPR001611 GO:0005515
Lele08g1729 652 Pfam Leucine rich repeat N-terminal domain 25 60 IPR013210 -
Lele08g1729 652 SUPERFAMILY Protein kinase-like (PK-like) 366 632 IPR011009 -
Lele08g1729 652 PANTHER OS05G0588300 PROTEIN 11 635 - -
Lele08g1729 652 FunFam pollen receptor-like kinase 1 331 436 - -
Lele08g1729 652 CDD STKc_IRAK 368 631 - -
Lele08g1729 652 Pfam Protein kinase domain 365 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1729 652 SUPERFAMILY L domain-like 45 202 - -
Lele08g1729 652 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Lele08g1729 652 ProSiteProfiles Protein kinase domain profile. 362 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1729 652 FunFam Probable inactive receptor kinase At1g48480 437 640 - -
Lele08g1729 652 Gene3D Ribonuclease Inhibitor 24 178 IPR032675 -
Lele08g1729 652 Gene3D Transferase(Phosphotransferase) domain 1 437 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1729 Lele-ChrLele08 11754475 11756937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1729 23 647 Receptor kinase-like Gene Family AT1G48480 65.620 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele08g1729 Pkinase 5.4e-39 CL0016