Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1726 ATGGCAAGCAGGCAAGACAAGTCAGGCACAAGTAAAAGCAGCTTAGAGAACTTACTGGACTTGGACAAAACAAGAGTCACAAAAAGCATTGTGAAGCAACTGAGGCCCCAGAGGTCCATTCCTGAACACGGTCTAGAATTCAAGAAAATATCATATTGTGTCCAGAAGAAGCAGAAGAAGAATGGTGTTTGGATCAAGAAAGAAGCTTATCTTCTTCATGACATATCTGGGCAGGCAAACAGAGGTGAGATCATGGCGATCATCGGACCAAGTGGGGCCGGGAAATCGACATTCCTCGATGCCTTGGCCGGCCGGATTGCACAAGGGAGTCTTGAAGGATCAGTTAGAATAGACGGAAAACCAGTGAGTGCAAGTTACATGAAGATGGTATCCTCGTATGTGATGCAAGATGACCAGCTTTTTCCTATGTTGACAGTTCTTGAGACATTCATGTTTGCAGCAGAGGTTAGGCTTCCTCCTACACTCTCCAGGGAGAATAAAAAGAAGAGAGTTCATGAGCTCCTTGATCAGCTCGGCTTGCAGAGTGCAGCACATACGTACATTGGTGATGAAGGGACAAGAGGAGTGTCAGGAGGGGAAAGAAGAAGAGTATCTATTGGCATAGACATAATTCATAAGCCTTCCCTTCTATTTCTTGACGAACCAACCTCAGGTCTTGATTCTACAAATGCTCACAATGTAGTGGAAAATATTAAACACATAGCTCAAGGTGGTAGTATTGTCCTCATGACCATACATCAGCCTTCATTCAGAATTCAAAAGCTCCTGGACCAGATCACAATACTTGCAAGGGGAAGACTGACATACATGGGAAGGCCAGATGCATTACCTGCTTATCTTTCTGGTTTTGGAAGAACAATACCAGATGGAGAAAATAGTATTGAGTACATGTTAGATGTTATTAAAGAATATGATGAATCAACAATTGGTTTAGACCCCCTTGTTCGCTTCCAATGCTATGGCCAGAAGCCTGACCAAGCAGCCATGACACCAATCCCTAAAACACCAAAGACTCCAAGAACACCTCACAGAAGTAGCACCCCTGCATCTAAATATATCATCAACTTGCTGTCACAAGGGTTCACTCCTGGAACATCAAAGCCTGACTCCAACCAAGGTGGTGGTGGTGGTGGTGGTGGTGATGATAATGATAATGATGATGATGAGAGTTTCGATTACTCGCTTGAGAGGAAAAGTGCTCAGACCCCAAGAAATGTGGCCAGTGCTGGTGTCCCACGTTTGGCTTCTCAGTTCTACCAAGAGTTCTCAGCCAAGGATTTCTCTGTCTGGCTTTACCATGGTGTGGTAGGAACTCCTAAACGCCCCATATCATGGACTCCGGCATGGAACCATGGTGTGGTAGGAACTCCTAAACGCCCCATATCATGGACTCCGGCGAGAACTCCGGCATGGACTCTGGGGAAAACTCCAGGGTGTACACCTGCAAAAACACCTAATTCAGGGCCAACAAGTGCTATTTCTAGCCCATATTCTGCATCTTATCAGGAACCTCATGGAGCCAAGACCTCCAATGTAGTTAGCCAATCTATGGACTTCTGTGGACCTTCTTATGAAGAGTTTGAGATTGAAAAAGCTCTTGATGAGCCACATCTAGGATCAAAATATGCAAATCCTTGGCTGCGCGAGGTTGCAGTGCTGTCATGGAGAACTGCACTCAATGTGATTCGAACACCTGAACTCTTCCTGTCCCGTGAGGTTGTGTTAACTGTTATGGCACTTATCCTCTCCACCATCTTCAAAAACCTTGGTCATCTCACTTTCAAAGACATAAGTAGGCTTCTCAACTTCTATATCTTTTCAGTGTGCCTAGTTTTCTTCTCTTCCAATGATGCTGTCCCTACTTTCATCTTAGAAAGGTTCGTCTTCATCAGAGAGACATCCCACAATGCTTACCGTGCTTCTTCATACGTCATTTCTTCCCTCATTGTCTATCTCCCATTTTTCGCCGTCCAAGGCTTCACATTTGCCGCCATAACCAAAGTATTCCTTCACCTAAAAAGCAGTCTCTTCCACTTTTGGATGATCCTCTTTGCCTCGCTTATCACTACCAATGCCTATGTGATGCTTGTTAGTGCACTTGTTCCAAGCTACATCACAGGGTATGCAGTAGTTATAGCCACAACTGCTCTCTTCTTCTTAACTTGTGGTTTCTTCCTCAAGAGAACTCAGATACCTTCCTATTGGAAGTGGCTCCATTATATTTCTGCAATCAAATATCCATTTGAGGCATTGCTGACAAATGAATTCAAGAATGACAAATGCTACACAGGGAACCCGGCAGATTTGTCTCCTGGCCCTTTAGGGGAAGTGAAGCTAAGCCCCCACCATAACATCTCCAGTAATTGCTTAATAGGAGAAGATGTTTTATCCTCAATGGATATCAATAAAGACATATGGTATGACATATTTATCCTGCTGGCTTGGGGCGTTCTTTACAGGTTCTTATTCTATTTGGTTTTGAGATTTTACTCCAAGAATGAAAGAAAATGA 2532 0.44 MASRQDKSGTSKSSLENLLDLDKTRVTKSIVKQLRPQRSIPEHGLEFKKISYCVQKKQKKNGVWIKKEAYLLHDISGQANRGEIMAIIGPSGAGKSTFLDALAGRIAQGSLEGSVRIDGKPVSASYMKMVSSYVMQDDQLFPMLTVLETFMFAAEVRLPPTLSRENKKKRVHELLDQLGLQSAAHTYIGDEGTRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTNAHNVVENIKHIAQGGSIVLMTIHQPSFRIQKLLDQITILARGRLTYMGRPDALPAYLSGFGRTIPDGENSIEYMLDVIKEYDESTIGLDPLVRFQCYGQKPDQAAMTPIPKTPKTPRTPHRSSTPASKYIINLLSQGFTPGTSKPDSNQGGGGGGGGDDNDNDDDESFDYSLERKSAQTPRNVASAGVPRLASQFYQEFSAKDFSVWLYHGVVGTPKRPISWTPAWNHGVVGTPKRPISWTPARTPAWTLGKTPGCTPAKTPNSGPTSAISSPYSASYQEPHGAKTSNVVSQSMDFCGPSYEEFEIEKALDEPHLGSKYANPWLREVAVLSWRTALNVIRTPELFLSREVVLTVMALILSTIFKNLGHLTFKDISRLLNFYIFSVCLVFFSSNDAVPTFILERFVFIRETSHNAYRASSYVISSLIVYLPFFAVQGFTFAAITKVFLHLKSSLFHFWMILFASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPSYWKWLHYISAIKYPFEALLTNEFKNDKCYTGNPADLSPGPLGEVKLSPHHNISSNCLIGEDVLSSMDINKDIWYDIFILLAWGVLYRFLFYLVLRFYSKNERK 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1726 843 CDD ABCG_EPDR 45 278 - -
Lele08g1726 843 ProSitePatterns ABC transporters family signature. 196 210 IPR017871 GO:0005524|GO:0016887
Lele08g1726 843 MobiDBLite consensus disorder prediction 479 505 - -
Lele08g1726 843 MobiDBLite consensus disorder prediction 486 505 - -
Lele08g1726 843 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 45 296 IPR003439 GO:0005524
Lele08g1726 843 SMART AAA_5 81 281 IPR003593 -
Lele08g1726 843 Pfam ABC-2 type transporter 253 309 IPR043926 GO:0140359
Lele08g1726 843 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 286 IPR027417 -
Lele08g1726 843 MobiDBLite consensus disorder prediction 369 398 - -
Lele08g1726 843 Pfam ABC-2 type transporter 557 763 IPR013525 GO:0016020|GO:0140359
Lele08g1726 843 Pfam ABC transporter 72 224 IPR003439 GO:0005524
Lele08g1726 843 Gene3D - 44 288 IPR027417 -
Lele08g1726 843 MobiDBLite consensus disorder prediction 333 354 - -
Lele08g1726 843 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 28 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1726 Lele-ChrLele08 11712864 11716495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1726 71 292 Calmodulin-binding Proteins AT2G36910 24.783 8.29e-15 77.0