Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1713 ATGGCGGACGCACCTGCTGAACCTGAACTTCCTCACTTGGACCAAATGCTCGGCCTTCTCAGGATTCACATCAAGCGTGGTATCAATCTCGCTGTTCGTGATGTTCGCAGCAGCGATCCTTACATCGTCATTAGGATGGGCAAGCAGAAACTCAAGACTCGCGTTATTGAGAAAGATATTAATCCTGAGTGGGATGAAGACCTTACACTTTCTGTCGTGGACCCAAAGCTTCCGGTAACATTGACTGTGTATGATCATGATACTTGGAGCCCAGATGACCCGATGGGAGATGCAGAGTTTGATATCATTCCATTTCTAGAAGCATTGAGGATGCAGGTATCGGACCTGCCAGACGGAACAATTATAACAAGAGTGCAACCAAGCCGGCAAAATTGCCTAGCAGAGGAAAGCTGCGTTGTTTTTAACGAAGGCAAGATCATCCAAGATATGGCCCTTAGATTGCGACATGTCGAAACTGGAGAACTGGAAATCCAATTGCAATGGATTGAGCTTCCACGTGCTAAGTAG 528 0.4678 MADAPAEPELPHLDQMLGLLRIHIKRGINLAVRDVRSSDPYIVIRMGKQKLKTRVIEKDINPEWDEDLTLSVVDPKLPVTLTVYDHDTWSPDDPMGDAEFDIIPFLEALRMQVSDLPDGTIITRVQPSRQNCLAEESCVVFNEGKIIQDMALRLRHVETGELEIQLQWIELPRAK 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1713 175 SMART C2_3c 19 114 IPR000008 -
Lele08g1713 175 Pfam C2 domain 18 102 IPR000008 -
Lele08g1713 175 CDD C2_ArfGAP 17 160 - -
Lele08g1713 175 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 18 111 IPR035892 -
Lele08g1713 175 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 15 173 IPR044562 -
Lele08g1713 175 ProSiteProfiles C2 domain profile. 4 118 IPR000008 -
Lele08g1713 175 Gene3D C2 domain 15 174 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1713 Lele-ChrLele08 11601635 11603897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1713 50 175 C2H2 Transcription Factor Family AT1G70790 53.125 1.20e-43 140