Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1708 ATGGTGGGTTATAATGATGGAACTGAGTTCAACATGCCTGATCATGCATTCAATGGAAGGAAGCTTAGGCCTTTAGTTCCAAGGCCACTGGCTTCACCTATTACACATCATGCTACTGATTTCTTCACAGAGTGTCACAATCTGGCATCAGTGACAGATCAAAGCAAGAGAGAGTTCAACAATACTCCACCAGTTGTGGTGAGCACAAGGTGGAATCCTACCCCAGAACAGCTGAGAGCTCTTGAAGAGTTGTATCGGAGAGGAACAAGAACACCATCTGCAGAACAAATTCAGCATATAACAGCACAGCTTCGAAGGTTTGGGAAAATTGAAGGGAAGAATGTTTTCTATTGGTTTCAGAATCATAAAGCCAGAGAGAGACAGAAAAGACGCCGTCAAGTGGAATCAGCAGCTGCAGTAGTAGCAGAAGGGCACCACTACGATCTTGATGCTCTTGAAAAGAAAGACTTAGGCGCAAGTAGGACAGCGTTTGAAGTCGAACAGACTAGTAGCAAGAACAACTGGGCACCCTCTACAAACTGCAGTGTTTCTCTTATTGCAGAGGAATCTGTCTCAATACAACAAAGAGCAGCAAAAGCAGCAGCAGCAGCAGTTGTTGCAGAGTGTAGAACAGATGGTTGGGTTCATCAATTCCATGAAGGAGAATTACAACAACAAAGAAGAAATAACTTTATGGAAAGGAATGCCACGTGGCAGATGTTACAGGCTCCTCCCCCTACAGCTGCTGCTACAACTGCTCCCTCTACAACTAGCATTACAGCCACAATAATGGACCCAACGAAGCTCATCGCAAAGAACCATTGTGATCTCAGCTTTTTCATTTCTCCTCACACTGATGATGATCATGAAAATGGCGGTGGTGAGATCCTCAGGGAAGATGTTCATCATAACAACCGTGTGGAATCACAAACACTTCAACTTTTCCCACTAAGGAGTGGATCGGGAGATGGCTGCTGCAATAATAATAACATTAATAATAATCAGAGAGAGACAGAGATGTCATCGGTATCCGCCATGGATTCCAAGTACTTGCCCCCAAGCCACCAGTTCTTTGAGTTCCTTCCATTGAAGAACTAA 1098 0.4426 MVGYNDGTEFNMPDHAFNGRKLRPLVPRPLASPITHHATDFFTECHNLASVTDQSKREFNNTPPVVVSTRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQVESAAAVVAEGHHYDLDALEKKDLGASRTAFEVEQTSSKNNWAPSTNCSVSLIAEESVSIQQRAAKAAAAAVVAECRTDGWVHQFHEGELQQQRRNNFMERNATWQMLQAPPPTAAATTAPSTTSITATIMDPTKLIAKNHCDLSFFISPHTDDDHENGGGEILREDVHHNNRVESQTLQLFPLRSGSGDGCCNNNNINNNQRETEMSSVSAMDSKYLPPSHQFFEFLPLKN 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1708 365 ProSiteProfiles 'Homeobox' domain profile. 74 129 IPR001356 GO:0003677
Lele08g1708 365 SMART HOX_1 66 133 IPR001356 GO:0003677
Lele08g1708 365 SUPERFAMILY Homeodomain-like 69 133 IPR009057 -
Lele08g1708 365 FunFam WUSCHEL-related homeobox 4 68 135 - -
Lele08g1708 365 Pfam Homeodomain 69 128 IPR001356 GO:0003677
Lele08g1708 365 Gene3D - 67 128 - -
Lele08g1708 365 CDD homeodomain 69 130 IPR001356 GO:0003677
Lele08g1708 365 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 53 360 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1708 Lele-ChrLele08 11568989 11571158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1708 2 365 Wox Gene Family AT3G18010 36.658 3.12e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele08g1708 Homeodomain 1.5e-19 CL0123