Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1696 ATGGCACCTCGTGCCGACGGATACGGCGAAGGTGAGCTCTCCTCCAGCGAAGACGATGTTGGCTTGAACGAGGACTTAGATGCCCTCGCACGAGCCTGCAGGATCGCCGGCACTAACCCTGATAATCTTAAACCCACTTCTACCGTCGCTCCCGACAAAGAGAATGCAGACGCAGTGGTTCAGAAAGCACCTGACCCGCTTTTGGGCCCGGGCGATGCTCTCGTCCCCGTGTCAGATTCGGACGACGATCAGAGTGACCTCCAGTATCTTCATAGAGTGCAGGAACTTTACCAGCCATTGAAAGTTCTTCCGGCGCTTTCTTTGTCTGATGATGAAGAAGATGATATGGAACTCGCACGGGTCATTATGAAACGTTTTTCTGCTTATAAAAGAGGCCCTGATGAAGATAATGTGGATAAAATGGCAGAGGGAGCTCATACCTCAGGTCCACGCTCTGAGCAGGAACTTGATAACAGCATGACATCTAAAGGATTAGATCCTGGTGAATCATGCCCTGTTTCTCAGAATGCTATTGAGACCACCAGTTTATTGACTGGTGATGTTGAGAGACATCCTTTTAACATCAATGAGAGGTGTAAACCCGAAGCTTGCAAGTCATCGAAGATACCGGACAAAAGATCAAAATTTCCTTTGTCTGCTCAGGTTTTTATTGATGCAATAAAAAAGAATAGATCTTTCCAGAGGTTACTTCGAAGTAAGTTGATTCAGATGGAAGCAAAAATTCAAGAAAACAAACAGTTGAGGGAAAGAGTTAAACTTCTTAAAGAATTTCAGATTGATGATAAGAAAATATCTCCAATGTGTTATGGCCCAGCTGAGAATGCTCATGTTGCTGAATATAGGATGGTGTTGGAACGATCTCCATTCTCATTGGATCGGAAAAAGTGGTCTAATGTGGAGAGGGAGAATCTTGCCAAGGGAATAAAGCAACAATTTCAAGAACTGGTGCTTCAAATGTCAATAAATCAAGACAGTTCAGAGTGGTTTTCTGGATATGCGAATAACTTTGATACCATACTTGCATCTATTAAAGATCTTGAGATTACGCCTGAGAACATTAGAAAGTTTCTGCCTGAATTCAATTGGGATCAGTTGGCTTCCAAGTATGTTGTTGGTCGTACTGGTGCAGAATGTGAAGCAAGGAAATATGAATGATGGAAGAAGTCCCTCTGTCCTGATAGGAAAGGGAGCTTTACCGTAGAAGAAGATGAACGCTTGATAGTGGCTGTCCATCTCTTTGGACGGAAATGGAATCAGATAGCTAGATTTGTTCCTGGCCGGACCCAAGCTCAGTGTAGAGACAGGTACGTCAATAGTTTGGATCCCTCTTTGAAATGGGGTGGATGGACTAAGGAAGAAGATTCGAGATTGAAAAAAGCAATTGCCAAACATGGATTCTGCTGGTCAAAGGTTGCTGCAGATGTGCCTCCACGAACTGACAGTCAATGCAGGAAGAGATGGCGGGTTCTATTTCCTGACCAAGTTCCCATGCTTCAAGCAGCTAGAAAGATGAAAAAATCTGCTCTGATCAGTAACTTTGTTGATCGAGAGTCTGAACGGCCTTGCCTTTCTTTAAACGATTTTCTTCCTTTGGCACTGTTAGATCCACCATCTGATCCAGATGCTGTGAACCTCCCTCAGAAGCGGAAGAATATGTCAAGCAATACTTCTGAGAAAAAGAGGCCCAAAAAACGCACAAAAAAGGCTCAAAGTTGTCTCAAGAAAGCAGAGGCTGACAAGGTTGAGCCTTGTAGTGGACATGATGCCCACGAGCTGAAGATTACTGAACCACATTTGGAGGACAACTCAGTTGAAACCGTGCATGATCATTCCCCACTGGACTTGGTTGTGAAAACAACGAATGGCCAAGGGGATTTAGGTGGACATAATAATATCGATAAGCTAATTGAGTCAAATCAAATGTGGGAGGGTTCTAATGAATTACATGAAGTGAACCATCCTGGTATAACACCTTGTGAGAATCCAGAAGCAGGGACAACGGACGGGCATTGTGAGAAAATCTCTTCTGTGGACCCATTGAAATGCCAAACTGGAAGAAAGTCAACGCTATCTGCAAGTATATCTGATAGTGCAGTTGTAGGTAGTGAGGTTGCTGGAAATACTACTTCAAAGAAGGAAAGAAAGAAGAAAGGGAAACACAACAGAATGGTTAGAAGTGTTCAAACAGCAGAGGACCACCTGGTTAAGAATAAAATGTCAAAACCTGGAAACCTATCTTCTATTCAGATTTTGGAAAGTCAGGATGAAGACAATATAACTCTTGCTAGATTTGTACGCAGTGTGTCGAACAAAGGTGTTAAAAATACAGATCAAATGATTCAGGCTGCTTCCTTTGCTAGTTGCTCCATAAAAAAATCACGGAGATCTCGTCGAGCAGCCAGACAAACTCATGATTACCTGCCCTTTAGTTTGAAAAGGGGGCATGAATTGCTTTCTGAAGTGCACAACGGTCATGACAGCAACCAAGAAACGTTGGTCATGCAAGACAAGTTAAATAAAGATTGTATTGATGTTACACCTTTGACTCTGTTGGTCCAAAATCATCCTTGCAATTTGAAGAACATGTCAACCAGTGAAGCTGATGACAAAGGGAAGGCAATGTCAGGGTCATTTGATGAGCAGACTGTGTTTTTGGATGGTGTGACAGAACCCAGAAACATCGATGTTGGAGAGGATGTGCCTACTGACGTTACCCTTGCTTCCTTCCTGAAAAAGAAGAAAAGAAAGGGCAAGGCAATGGCAAAGCCAGTTGATGAGCAGGCTTTAGTTTCGAATGGTTTGAAAGCATGA 2832 0.4322 MAPRADGYGEGELSSSEDDVGLNEDLDALARACRIAGTNPDNLKPTSTVAPDKENADAVVQKAPDPLLGPGDALVPVSDSDDDQSDLQYLHRVQELYQPLKVLPALSLSDDEEDDMELARVIMKRFSAYKRGPDEDNVDKMAEGAHTSGPRSEQELDNSMTSKGLDPGESCPVSQNAIETTSLLTGDVERHPFNINERCKPEACKSSKIPDKRSKFPLSAQVFIDAIKKNRSFQRLLRSKLIQMEAKIQENKQLRERVKLLKEFQIDDKKISPMCYGPAENAHVAEYRMVLERSPFSLDRKKWSNVERENLAKGIKQQFQELVLQMSINQDSSEWFSGYANNFDTILASIKDLEITPENIRKFLPEFNWDQLASKYVVGRTGAECEARKYEXWKKSLCPDRKGSFTVEEDERLIVAVHLFGRKWNQIARFVPGRTQAQCRDRYVNSLDPSLKWGGWTKEEDSRLKKAIAKHGFCWSKVAADVPPRTDSQCRKRWRVLFPDQVPMLQAARKMKKSALISNFVDRESERPCLSLNDFLPLALLDPPSDPDAVNLPQKRKNMSSNTSEKKRPKKRTKKAQSCLKKAEADKVEPCSGHDAHELKITEPHLEDNSVETVHDHSPLDLVVKTTNGQGDLGGHNNIDKLIESNQMWEGSNELHEVNHPGITPCENPEAGTTDGHCEKISSVDPLKCQTGRKSTLSASISDSAVVGSEVAGNTTSKKERKKKGKHNRMVRSVQTAEDHLVKNKMSKPGNLSSIQILESQDEDNITLARFVRSVSNKGVKNTDQMIQAASFASCSIKKSRRSRRAARQTHDYLPFSLKRGHELLSEVHNGHDSNQETLVMQDKLNKDCIDVTPLTLLVQNHPCNLKNMSTSEADDKGKAMSGSFDEQTVFLDGVTEPRNIDVGEDVPTDVTLASFLKKKKRKGKAMAKPVDEQALVSNGLKA 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1696 943 SUPERFAMILY Homeodomain-like 427 501 IPR009057 -
Lele08g1696 943 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 401 442 IPR017930 -
Lele08g1696 943 SMART sant 452 500 IPR001005 -
Lele08g1696 943 SMART sant 401 449 IPR001005 -
Lele08g1696 943 SMART sant 299 395 IPR001005 -
Lele08g1696 943 CDD SANT 456 498 IPR001005 -
Lele08g1696 943 Pfam Myb-like DNA-binding domain 405 464 - -
Lele08g1696 943 ProSiteProfiles Myb-like domain profile. 448 498 IPR001005 -
Lele08g1696 943 ProSiteProfiles Myb-like domain profile. 401 447 IPR001005 -
Lele08g1696 943 Coils Coil 237 264 - -
Lele08g1696 943 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 393 939 - -
Lele08g1696 943 MobiDBLite consensus disorder prediction 133 173 - -
Lele08g1696 943 CDD SANT 404 447 IPR001005 -
Lele08g1696 943 MobiDBLite consensus disorder prediction 1 83 - -
Lele08g1696 943 ProSiteProfiles SANT domain profile. 400 445 IPR017884 -
Lele08g1696 943 Gene3D - 452 500 - -
Lele08g1696 943 Gene3D - 400 451 - -
Lele08g1696 943 SUPERFAMILY Homeodomain-like 374 443 IPR009057 -
Lele08g1696 943 MobiDBLite consensus disorder prediction 151 173 - -
Lele08g1696 943 MobiDBLite consensus disorder prediction 543 581 - -
Lele08g1696 943 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 448 502 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1696 Lele-ChrLele08 11471672 11479331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1696 209 579 MYB-Related Transcription Factor Family AT3G18100 34.109 5.10e-83 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele08g1696 Myb_DNA-bind_6 1.1e-14 CL0123