Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1694 ATGAGAAGGCCTAGCTCTCAGAAACCAGACTCTCATAAACGACCATGGTCCAAGGAAGAAGACCAGAAACTCATTGATTATATCCAAAAACATGGTGAAGGTTGCTGGCCTTCACTTCCTCAGGCTGCAGGGTTGCGTCGCTGCGGAAAAAGCTGTAGGCTGAGATGGTTAAATTATCTGAAGCCAGACATTAAACGAGGAGATTTCGGAGAAGACGAAGAGGACTTGATCATCAGGCTTCATGCTCTTCTTGGCAACCGGTGGGCACTGATAGCGGGAAGATTACCAGGAAGAACTGATAACGAGGTGAAGAATTACTGGAACTCACACATAAGAAAGAAGCTTATTCAAATGGGTCATAATGTTGGTGATCGCTTTAAAGGCTCTACACTTATTAATGGAACTGCAAAATCATCTATCATTAACAAACCTAGTAACAATCACAAGGATAACGAAGCTTCCAATCCAGCAGTCAAGTTGCTTGCTACTGAAAACGACGATGAAGACGACGGCCATCATCAGGTGTTTCAGTCAACAAGAAGCAAGGCCAAGTTCAACCTCAACGCTTTTCCAGAGTTGAATCTTGATCTCACACTCGCTACTACTTATCATTGA 615 0.4358 MRRPSSQKPDSHKRPWSKEEDQKLIDYIQKHGEGCWPSLPQAAGLRRCGKSCRLRWLNYLKPDIKRGDFGEDEEDLIIRLHALLGNRWALIAGRLPGRTDNEVKNYWNSHIRKKLIQMGHNVGDRFKGSTLINGTAKSSIINKPSNNHKDNEASNPAVKLLATENDDEDDGHHQVFQSTRSKAKFNLNAFPELNLDLTLATTYH 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1694 204 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Lele08g1694 204 CDD SANT 15 60 IPR001005 -
Lele08g1694 204 FunFam MYB-related transcription factor 12 65 - -
Lele08g1694 204 CDD SANT 71 111 IPR001005 -
Lele08g1694 204 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Lele08g1694 204 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 164 - -
Lele08g1694 204 SMART sant 12 62 IPR001005 -
Lele08g1694 204 SMART sant 65 113 IPR001005 -
Lele08g1694 204 MobiDBLite consensus disorder prediction 1 20 - -
Lele08g1694 204 FunFam MYB transcription factor 67 122 - -
Lele08g1694 204 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Lele08g1694 204 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Lele08g1694 204 Gene3D - 68 157 - -
Lele08g1694 204 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Lele08g1694 204 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Lele08g1694 204 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Lele08g1694 204 Gene3D - 13 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1694 Lele-ChrLele08 11453130 11454822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1694 2 200 MYB Transcription Factor Family AT4G09460 49.029 1.80e-63 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele08g1694 Myb_DNA-binding 6.9e-15 CL0123