Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1690 ATGGGGGGTGGAACGACTCTCGTGGACGGGATTCGTCGCCTTTTTCAACGTCGACCTTCTTCTGCAATCAAGTCCTCTGATGAAGACAATCATAACCATCACGATGCCGATCGTAGTGCTAATAGCAACCATAGCCACAAGTTCGTCAGAGATTTGCGCGCTCAATTAGCTACTATTCCCAAACAGGAGAGAGACGAAGGCGAGGGGGCCGAGGATGGGCTCACGATTGAGGAAGATTTTGATATCTCTGGCTTGAAGCATATCAAGGTTCCCACACGGGCGTACTTTAAAGTTGCTTCCATGGATCCTTCAAAAAAGGGCACATCGGAAACAGAGTTCTTCACTGAGTATGGAGAGGCAAGTCGATATCAGGTCCAAGAAGTTATTGGAAAAGGAAGTTATGGTGTCGTAGGTTCTGCAATTGATACTCATACAGGGGAAAAGGTTGCAATTAAGAAAATTAATGATGTTTTTGAGCATGTCTCAGATGCCACACGGATCCTAAGAGAAATTAAACTCCTTCGGTTGCTCCGACATTCTGATGTAGTAGAAATCAAGCATATAATGCTTCCTCCTTCACGGCGAGAGTTCAAGGATATCTATGTTGTGTTTGAGTTAATGGAATCTGACCTTCATCAAGTAATCAAGGCTAATGATGATCTTACACCTGAGCACCATCAATTTTTCTTGTACCAACTTCTTCGGGGCCTGAAATATATACATTCTGCAAATGTGTTTCATCGTGACTTAAAGCCCAAAAATATTCTTGCTAATGCTGATTGCAAACTGAAAATATGTGATTTTGGGCTTGCTCGAGTTTCCTTTAATGATGCACCTTCTGCTATATTCTGGACTGACTATGTTGCAACTCGGTGGTATCGTGCGCCAGAATTATGCGGTTCTTTTTTCTCAAAATATACCCCTGCAATTGATATTTGGAGCATCGGATGCATATTTGCAGAAATACTCTCTGGGAAGCCATTGTTCCCCGGTAAAAACGTGGTGCATCAATTGGATCTCATGACTGATTTACTTGGTACTCCTCCTGCTGAAACCATTTGGAGGATACGTAATGACAAAGCTAGAAGGTACCTTAATAACATGCGGAAAAAGCAACCAGTTCCACTTTCTCAAAAGTTCCCTTATGCGGATTCATTGGCCCTTCGTCTACTGGAGCGCCTACTTGCATTTGATCCAAAAGATCGTCCTTCAGCTGAAGAGGCATTAAGTGATCCTTACTTTCGCGGCTTGGCAAATGCTGAGCGTGAACCAGCGTCTTCTCAACCGATTTCAAAACTTGAGTTTGAGTTTGAGAGAAGAAAATTGGCTAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTCTAGAGTATCATCCTCAAATGCTCCAGGAATATCTGCGTGGTGGAGATCAGACTAGCTTCATGTATCCGAGTGGTGTTGATCGGTTCAAGAGACAGTTTGCACATCTTGAGGAGCACTATGGAAAAGGTGAAAGAAGCACTCCTTTGCAGAGACAACATGCCTCCTTGCCTAGAGAACGAGTACTTGCTCTCAAGGATGAAGCCGGTCAAAACAACGACTTTGAAAAGCAAACTGGTGCAGTTGTTGCTACAAATCTTCACAGTTCTGATGGGACTGAACAAAATGGACCAAATCAATGTGCACGGAGCCTGTTGAAGAGCGCCAGCATCAGCGGCTCCAAGTGTGTAGGTGTGAAGCCAAGTAAAGATCCAGAGGGGGAGCCTATTGAAGAGATGAATGATGAGCAAGTAGATGGGTTGTCAGAGAAGCTTGAAACTGTTCGTGCTTAG 1815 0.4375 MGGGTTLVDGIRRLFQRRPSSAIKSSDEDNHNHHDADRSANSNHSHKFVRDLRAQLATIPKQERDEGEGAEDGLTIEEDFDISGLKHIKVPTRAYFKVASMDPSKKGTSETEFFTEYGEASRYQVQEVIGKGSYGVVGSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHSDVVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHSANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEILSGKPLFPGKNVVHQLDLMTDLLGTPPAETIWRIRNDKARRYLNNMRKKQPVPLSQKFPYADSLALRLLERLLAFDPKDRPSAEEALSDPYFRGLANAEREPASSQPISKLEFEFERRKLAKDDVRELIYREILEYHPQMLQEYLRGGDQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRERVLALKDEAGQNNDFEKQTGAVVATNLHSSDGTEQNGPNQCARSLLKSASISGSKCVGVKPSKDPEGEPIEEMNDEQVDGLSEKLETVRA 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1690 604 CDD STKc_TDY_MAPK 122 460 - -
Lele08g1690 604 SUPERFAMILY Protein kinase-like (PK-like) 119 419 IPR011009 -
Lele08g1690 604 MobiDBLite consensus disorder prediction 568 604 - -
Lele08g1690 604 ProSiteProfiles Protein kinase domain profile. 123 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1690 604 ProSitePatterns MAP kinase signature. 158 261 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lele08g1690 604 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 116 467 - -
Lele08g1690 604 SMART serkin_6 123 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1690 604 MobiDBLite consensus disorder prediction 1 46 - -
Lele08g1690 604 Gene3D Phosphorylase Kinase; domain 1 139 461 - -
Lele08g1690 604 FunFam Mitogen-activated protein kinase 209 438 - -
Lele08g1690 604 ProSitePatterns Protein kinases ATP-binding region signature. 129 153 IPR017441 GO:0005524
Lele08g1690 604 Pfam Protein kinase domain 123 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1690 604 MobiDBLite consensus disorder prediction 22 46 - -
Lele08g1690 604 FunFam Mitogen-activated protein kinase 439 461 - -
Lele08g1690 604 FunFam Mitogen-activated protein kinase 112 217 - -
Lele08g1690 604 Gene3D Transferase(Phosphotransferase) domain 1 209 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1690 Lele-ChrLele08 11412811 11419043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1690 1 592 MAP Kinase Gene Family AT1G73670 70.149 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lele08g1690 Pkinase 2.7e-67 CL0016