Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1686 ATGTATATTGAGGAGGACATCCGTTCTCTACAGCTTGATTCAGCAGATTTAACAGAAGACCATAATGGTGTTGTTAATCCGGAGGATGCAAAGCCTGAAGAAGTTGAGAATTCCGCTGAGATGGATGAAGGTCTAAACAAGGAAGTTAAGGCAAAGCCTGTAAAGGCTGAGTCTAAAGATAAGGAAATTCCTTCAGTGGAAGATCAAGGGGATGTGACGACAGATAGGAAAAGACACTTGAATGTTGTGTTCATTGGTCATGTTGATGCTGGTAAGTCTACAACAGGAGGCCAGATTCTTTTCCTAAGTGGTCAGGTTGATGAACGTACTATCCAAAAATATGAAAAAGAAGCAAAGGACAAAAGCAGAGAAAGTTGGTATATGGCTTATATAATGGACACTAATGAAGAGGAGAGGGTAAAGGGCAAAACGGTTGAAGTTGGGAGAGCGCATTTCGAGACAGAAAAAACAAGGTTTACAATTTTGGATGCACCTGGTCACAAAAGCTATGTCCCCAACATGATCAGTGGTGCGTCTCAAGCTGATATTGGAGTTTTGGTTATTTCTGCTCGAAAGGGAGAATTCGAAACTGGATATGAGAGAGGCGGACAAACCCGGGAACACGTCCAGCTTGCAAAGACATTGGGTGTGTCTAAGCTAGTTGTTGTTGTTAATAAAATGGACGAGCCTACAGTGAAGTGGGCAAAAGAAAGGTATGATGAAATTGAGTCAAAGATGATTCCTTTTCTTAAGTCATCGGGATACAATGTGAAGAAAGATGTACTGTTTTTACCAATGTCTGGGCTGACTGGTGCAAACGTCAAAACAAGAGTGGATAAAAGCACTTGTCCTTGGTGGGATGGTCCCTGCCTATTTGAAGTCCTTGATGGTGTTGAAATTCCACCTCGTGACCCCAAAGGTCCTTTCAGGCTGCCCATAATTGACAAATTCAAAGACATGGGAACTGTTGTGATGGGAAAAGTAGAATCTGGTACTGTCCATGAAGGGGATTCCTTGTTGGTTATGCCAAATAAGGATCATGTAAAAGTTGTTGCTGTGTTGATTGATGAAGATAGGGTCAAACGTGCAGGACCTGGTGAGAATTTACGGGTTAGAATGTCTGGTGTTGAAGAAGAAGACATATTAGGCGGGTTTGTTCTGTCTAGTGTTGAAAATCCAATACCAGCTGTTACTGAGTTTGTGGCTCAGCTGCAGATCCTTGAATTGCTGGACAATGCTATTTTTACTGCTGGGTACAAGGCTGTTTTGCATATCCACAGTGTTGTTGAAGAATGTGAGATTGTTGAGCTCCTTCAGCAAATTGATCCAAAGACAAAGAAACCTATGAAAAAGAAGCCTCTCTTTGTGAAGAATAATGCTGTCGTTGTCTGCCGAGTTCAGGTTAATAATACGATATGCGTTGAGAAATTCTCTGATTTCCCCCAACTTGGGAGGTTCACTCTTCGCACTGAAGGAAAAACTGTTGCAGTGGGAAAAGTCACTGGTTTTTAA 1512 0.4193 MYIEEDIRSLQLDSADLTEDHNGVVNPEDAKPEEVENSAEMDEGLNKEVKAKPVKAESKDKEIPSVEDQGDVTTDRKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETEKTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLVVVVNKMDEPTVKWAKERYDEIESKMIPFLKSSGYNVKKDVLFLPMSGLTGANVKTRVDKSTCPWWDGPCLFEVLDGVEIPPRDPKGPFRLPIIDKFKDMGTVVMGKVESGTVHEGDSLLVMPNKDHVKVVAVLIDEDRVKRAGPGENLRVRMSGVEEEDILGGFVLSSVENPIPAVTEFVAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVELLQQIDPKTKKPMKKKPLFVKNNAVVVCRVQVNNTICVEKFSDFPQLGRFTLRTEGKTVAVGKVTGF 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1686 503 Gene3D - 58 300 IPR027417 -
Lele08g1686 503 Pfam Elongation factor Tu C-terminal domain 394 501 IPR004160 -
Lele08g1686 503 Gene3D Translation factors 396 503 - -
Lele08g1686 503 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 55 301 - -
Lele08g1686 503 Pfam Elongation factor Tu GTP binding domain 77 281 IPR000795 GO:0003924|GO:0005525
Lele08g1686 503 PRINTS Yeast eukaryotic release factor signature 445 454 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Lele08g1686 503 PRINTS Yeast eukaryotic release factor signature 218 225 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Lele08g1686 503 PRINTS Yeast eukaryotic release factor signature 183 190 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Lele08g1686 503 PRINTS Yeast eukaryotic release factor signature 304 315 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Lele08g1686 503 MobiDBLite consensus disorder prediction 1 15 - -
Lele08g1686 503 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 133 148 IPR031157 -
Lele08g1686 503 PANTHER TRANSLATION FACTOR 67 501 - -
Lele08g1686 503 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 305 391 - -
Lele08g1686 503 CDD eRF3_II 308 389 - -
Lele08g1686 503 FunFam Putative translation elongation/initiation factor family protein 395 503 - -
Lele08g1686 503 CDD EF1_alpha 81 302 - -
Lele08g1686 503 Gene3D Translation factors 306 391 - -
Lele08g1686 503 SUPERFAMILY Translation proteins 300 393 IPR009000 -
Lele08g1686 503 MobiDBLite consensus disorder prediction 1 70 - -
Lele08g1686 503 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 77 306 IPR000795 GO:0003924|GO:0005525
Lele08g1686 503 CDD eRF3_C_III 395 501 - -
Lele08g1686 503 PRINTS GTP-binding elongation factor signature 81 94 IPR000795 GO:0003924|GO:0005525
Lele08g1686 503 PRINTS GTP-binding elongation factor signature 176 187 IPR000795 GO:0003924|GO:0005525
Lele08g1686 503 PRINTS GTP-binding elongation factor signature 220 229 IPR000795 GO:0003924|GO:0005525
Lele08g1686 503 PRINTS GTP-binding elongation factor signature 160 170 IPR000795 GO:0003924|GO:0005525
Lele08g1686 503 MobiDBLite consensus disorder prediction 22 70 - -
Lele08g1686 503 Pfam Elongation factor Tu domain 2 321 387 IPR004161 GO:0005525
Lele08g1686 503 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 397 502 IPR009001 -
Lele08g1686 503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 312 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1686 Lele-ChrLele08 11357903 11369696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1686 77 498 Eukaryotic Initiation Factors Gene Family AT5G60390 38.118 1.04e-95 295