Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1645 ATGAGTGATATCTACATATACCTAACCCATTTATTCTCTGGTAAATGCTTAAACTGGGCTTTGCAATATGCGGTACTGGTTACGTTACATGTGAAGATACTTTATATAGAACTAGATGCAGTCGCAGAAAATCCGCCTCCGGTGGGAGAAAATTCACGGCCTGGCAAGATGAAATTTATAATAGGTTTAACAAGTGGAGCAATTGGAACAGTGCTAATATGTATTATTATTTTTTGTTGTATAATCAAATCACTGAGGCAGAAAATAGATTTCTTGAAGAAGACATCAAGGGCTGACCAAAATATTGAGGCCTTCATTAGAAATCATGGACCTCTACCTCTCACAAGATATAAATATGCAGAGGTGAAAAAAATGACCAAATCTTTCCAAGTTAAATTGGGCCAAGGTGGTTATGGTTCTGTGTACAAAGGAGAACTACTCAATGGTTGTCCTGTTGCTATCAAGTTATTGAAGTCATCCAAAGGGAATGGGGAAGATTTTATCAATGAGGTTGCTAGCATCAGTAAAACTTCACATGTCAATGTTGTTACCCTTCTTGGGTTTTGTTTGGAAGGCAGAAAAAAGGCTCTTATATACGAGTTTATGCCAAATGGATCTCTTGACAAGTTCATTCAAAATACGACAGATAAAACTGGTCCATCCTTGACTTGGGAAAATTTGTATGAAATTGCAATTGGGACAGCTCGAGGACTTGAATACTTGTATAGAGGATGCAACACTCGAATTCTACATTTTGATATAAAGCCACATAACATTCTTTTGGATGAAGGCTTTTGTCCCAAGATCTCAGATTTTGGGCTTTCAAAGCTGTGTCCAAGGAAAGAGAGCATTGTTTCCATTTCAGAAGCTCGAGGAACTATAGGATATCTTGCTCCAGAGGTTTGGAATAGAAATATAGGAAGAGTTTCACATAAATCTGATGTTTTTAGTTATGGAATGCTGCTATTAGATATGGTTGGGGAGCGAAAGAATATGAATGCTGAAGACCGCACGACAGAGACTTATTTTCCAGATTGGATTTATGAAAAATTTGAGCAAGGCAGCAAATTGGGACAGGATAGGGCAGATGCGATGGATGAAAATGAAATTACGAAGAAATTGACCATTGTGGGTTTGTGGTGTATTCAAACATTTCCAACTCAAAGACCAACAATCAGTAGAGTTATTGAGATGTTAGAGGGAAGCTTAGACACTCTAGAAATGCCACCAAAGCCTGTCATGCTATCCCCTCCAAGAATAGAACTAGAATCTTCCGCAACTTGCAATACCAACTCAGAAAATGTTGACTATGATAGCTCTTCGCAAATTTTGGAGACCCACTAG 1344 0.3817 MSDIYIYLTHLFSGKCLNWALQYAVLVTLHVKILYIELDAVAENPPPVGENSRPGKMKFIIGLTSGAIGTVLICIIIFCCIIKSLRQKIDFLKKTSRADQNIEAFIRNHGPLPLTRYKYAEVKKMTKSFQVKLGQGGYGSVYKGELLNGCPVAIKLLKSSKGNGEDFINEVASISKTSHVNVVTLLGFCLEGRKKALIYEFMPNGSLDKFIQNTTDKTGPSLTWENLYEIAIGTARGLEYLYRGCNTRILHFDIKPHNILLDEGFCPKISDFGLSKLCPRKESIVSISEARGTIGYLAPEVWNRNIGRVSHKSDVFSYGMLLLDMVGERKNMNAEDRTTETYFPDWIYEKFEQGSKLGQDRADAMDENEITKKLTIVGLWCIQTFPTQRPTISRVIEMLEGSLDTLEMPPKPVMLSPPRIELESSATCNTNSENVDYDSSSQILETH 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1645 447 Gene3D Phosphorylase Kinase; domain 1 103 201 - -
Lele08g1645 447 Gene3D Transferase(Phosphotransferase) domain 1 202 408 - -
Lele08g1645 447 ProSiteProfiles Protein kinase domain profile. 127 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1645 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Lele08g1645 447 Pfam Protein tyrosine and serine/threonine kinase 129 399 IPR001245 GO:0004672|GO:0006468
Lele08g1645 447 PANTHER RUST RESISTANCE KINASE LR10-RELATED 97 423 IPR045874 GO:0004672
Lele08g1645 447 FunFam PR5-like receptor kinase 202 411 - -
Lele08g1645 447 ProSitePatterns Protein kinases ATP-binding region signature. 133 155 IPR017441 GO:0005524
Lele08g1645 447 SMART serkin_6 127 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1645 447 SUPERFAMILY Protein kinase-like (PK-like) 108 400 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1645 Lele-ChrLele08 11002707 11006528 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1645 43 427 Receptor kinase-like Gene Family AT1G66910 52.041 1.73e-134 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lele08g1645 PK_Tyr_Ser-Thr 9.2e-44 CL0016