Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1641 ATGCTGAAACTCGAGTGCTTTTTCCTTCCTCTGTTTTCCTTCTTCATCCATATTGCCTCTGCTAGCGATTCCAATTCATCTTCCACAATCTGTCCCACCTACAGCTGTGACGATGGGCTCCAAATCAGATACCCTTTCTGGCTCTTACGTGGTTCCCCTCCTGACCAGTACTGTGGTTACCAAGAATTCGGCCTCCTCTGCGGTGATAGCTACCCCATCTTCTCAATACATGGGTTATATTATTATGTCACAAACATAGACTATGATAATCATACCCTTCACCTCGTTGATTATGATACTTTCAACCGAACATGTCCAAGGGCACTTCACAGTGTTCCATTGGGCAACTTACCCCTTTCTCACTCCCCTTTGAATTTGAACCTTAGCTTTTATTACAATTGCAGTTCTCACCCCTCTGGTGTGTCGCCCATAAGGTGTTTGACATCTGGTGTGAATGAGTCCTTTGTGTTTGTGATGGGGAACGAGAGTACTTCTGGGGGTTTTGATTGGTCCAAGACTTGTGAAGAGAGTGTTGTGGTGACAGTGAGGAAGGATCGGATTACAAGTGAAGGGTTGATGAATGAGTATAAAGAGGCCATGAATGTAGGGTCTGTTCTTGATTGGCAAACTGCTGAGAGTTGTGAGGAGTGTGAAGCTTCTGATGGGATTTGTGGTTACAGTAATACCAGAAAGGAGTCCTTGTGCTTCTGCAAGGATGGCAACGTACAAAGCAATAGCTGCTCAGGGAGACGCAAAGTCCTTTTGTCAAAGCTAATTATTGGTTTAATAGCTGCAGGAGTGGGAGCTCTTATATGCATCATTATCTTCTTCTCAAGACAAAAAATATCATCATTAATGATCTCAGCAGATTTTTGGAAGATGAAAAAGAACGATGAAGGCGTTGAGTCCTTCATAAGAAATAATGGGCCTCTAACTATAAAAAGATATACATATTCAGAAATCAAGAAAATGACCAACTCTTTTGAAGTGAAATTGGGAGAAGGAGGTTATGGTAATGTATTCAGAGGAAGTATAGCCAACAGCTGTCCTGTGGCTGTGAAGGTATTGAAAGCATCCGAAGGGAATGGTGAAGAGTTTATCAATGAGGTTCTGAGCATTAGTAGGACTTCGCATGTAAATATCGTCACCTTCCTTGGTTTTTGTCTTGAAGGAAGCAAAAGGGCACTTGTATATGAACTTATGCCCAATGGGTCACTTGAAAAGTTCATAAGCAAGAGGGTTTTGGAGCCAAATTATCCACCCTTGAGTTGGGAAAAATTACTCCAAATTGCTGAAGGGATAGCCAAAGGACTTGAGTATTTGCATGGCGGCTGCAACACTCGAATCGTGCATTTTGACATAAAACCTACCAATATCCTATTGGACAAAAACTTTTGCCCAAAGATCTCAGATTTTGGGCTAGCTAAACTTTGTTCTAAAACACATAGTATTGTCTCAATGCTTGGTACAAGAGGAACTGTTGGTTATATTGCTCCAGAAGTGTGGAATAGGAACTTTGGAGGAGTCTCCCACAAGTCAGATGTGTACAGTTATGGAATGTTGATTTTGGAAATGGTTGGAGGAAGACAAGATATCAATAAAGAAATGAGTGATTCAAGTGATACATATTTGCCTCATTTGGTATACAAGCAAATTGAGTTAGACAAGAATATAACAGAACATGATGATGATATGAGCAGAGAGGAAAGTGAAATTGCAAAGAAGATGATGATGGTGGGATTATGGTGCATTCAGCCCATGCCATCAGATAGGCCTCCCATGAATAGAGTAATTGAGATGTTGGAAGGTAGCTTGGATCAGCTGTCAATACCACCAAAGCCCTTCATATTTCCACCTACAATTCCAACAACTGGAGAGGAAAATTTTGCTACAAATGGCGTTCTTTCATTTTCTGCCGATTACCCATGTGGTAGATAG 1938 0.4128 MLKLECFFLPLFSFFIHIASASDSNSSSTICPTYSCDDGLQIRYPFWLLRGSPPDQYCGYQEFGLLCGDSYPIFSIHGLYYYVTNIDYDNHTLHLVDYDTFNRTCPRALHSVPLGNLPLSHSPLNLNLSFYYNCSSHPSGVSPIRCLTSGVNESFVFVMGNESTSGGFDWSKTCEESVVVTVRKDRITSEGLMNEYKEAMNVGSVLDWQTAESCEECEASDGICGYSNTRKESLCFCKDGNVQSNSCSGRRKVLLSKLIIGLIAAGVGALICIIIFFSRQKISSLMISADFWKMKKNDEGVESFIRNNGPLTIKRYTYSEIKKMTNSFEVKLGEGGYGNVFRGSIANSCPVAVKVLKASEGNGEEFINEVLSISRTSHVNIVTFLGFCLEGSKRALVYELMPNGSLEKFISKRVLEPNYPPLSWEKLLQIAEGIAKGLEYLHGGCNTRIVHFDIKPTNILLDKNFCPKISDFGLAKLCSKTHSIVSMLGTRGTVGYIAPEVWNRNFGGVSHKSDVYSYGMLILEMVGGRQDINKEMSDSSDTYLPHLVYKQIELDKNITEHDDDMSREESEIAKKMMMVGLWCIQPMPSDRPPMNRVIEMLEGSLDQLSIPPKPFIFPPTIPTTGEENFATNGVLSFSADYPCGR 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1641 645 Gene3D Phosphorylase Kinase; domain 1 303 400 - -
Lele08g1641 645 FunFam PR5-like receptor kinase 401 613 - -
Lele08g1641 645 Pfam Wall-associated receptor kinase galacturonan-binding 31 97 IPR025287 GO:0030247
Lele08g1641 645 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Lele08g1641 645 SMART serkin_6 326 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1641 645 SUPERFAMILY Protein kinase-like (PK-like) 306 602 IPR011009 -
Lele08g1641 645 PANTHER RUST RESISTANCE KINASE LR10-RELATED 298 621 IPR045874 GO:0004672
Lele08g1641 645 Gene3D Transferase(Phosphotransferase) domain 1 401 610 - -
Lele08g1641 645 Pfam Wall-associated receptor kinase C-terminal 149 240 IPR032872 -
Lele08g1641 645 ProSiteProfiles Protein kinase domain profile. 326 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1641 645 Pfam Protein tyrosine and serine/threonine kinase 329 601 IPR001245 GO:0004672|GO:0006468
Lele08g1641 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1641 Lele-ChrLele08 10972127 10974740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1641 32 628 Receptor kinase-like Gene Family AT5G38260 40.351 7.60e-145 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lele08g1641 PK_Tyr_Ser-Thr 5.8e-46 CL0016