Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1628 ATGTACCTTCAAATCCTGCTATATAAATACCACTCTCATTCCCATTACCCTCTGCCATCTCAGAAAAACACTGCAATCTCAAGTCACATGGCTGAATTCACAACAGATTTTCAAAGCCTTAGACTTTCCTTTCCTTTCTCAGACATCGATCCAAACTTGGAACTTATAAGCCAGTTCACAGGCATGATGAGCCCACTTGTCCTGGACAACTCTAATGTCCAGAGCTTGATTCCTAATTTCTCTCAAGAGCTTGATTTTGCAGGAACTTTCCCTGTTTTATCAGCAGAAGATGAAATCCAGGATAGTCATCATCAAAAGAGGAAAGCCATGGATGTTACAGAGATGACCAGTTCTGTAAACCCAACTCCTGCAGTTTCTGAGAGTGGAAGCAAGAGTTCTGGAAGAGGTAAGAGAGCCAAGAGCTACGTAACAGAAGAAGGTAAACCAAAGGAAGTGGTTCATGTCCGAGCCAGAAGAGGTCAAGCTACAGACAGTCACAGTTTAGCAGAAAGGGTCAGAAGGGGGAAAATCAATGAAAAAATAAGACGCTTGCAGACCATTGTCCCAGGATACCATGGGTATGGCAGTGATGTTGGACGAGATTATAAACTATGTGCAGTCGTTGCAGCACCAGGTGGAGCAAGTACCTTCTACGACTTCAATTCAGAGACAGATGCCATAGAAACAATGCAGAGAGCAAGGGCATTCAAGGCAAAAGGATTATCATCAAGAAATGGTAGTGAAGAAGGATATGGTGGTGGAGGAATTTCTTGCTTTCATCCAACTTGGCATCTCTGA 798 0.4323 MYLQILLYKYHSHSHYPLPSQKNTAISSHMAEFTTDFQSLRLSFPFSDIDPNLELISQFTGMMSPLVLDNSNVQSLIPNFSQELDFAGTFPVLSAEDEIQDSHHQKRKAMDVTEMTSSVNPTPAVSESGSKSSGRGKRAKSYVTEEGKPKEVVHVRARRGQATDSHSLAERVRRGKINEKIRRLQTIVPGYHGYGSDVGRDYKLCAVVAAPGGASTFYDFNSETDAIETMQRARAFKAKGLSSRNGSEEGYGGGGISCFHPTWHL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1628 265 Pfam Helix-loop-helix DNA-binding domain 165 193 IPR011598 GO:0046983
Lele08g1628 265 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 193 IPR036638 GO:0046983
Lele08g1628 265 Gene3D - 152 242 IPR036638 GO:0046983
Lele08g1628 265 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 100 191 IPR024097 GO:0006355
Lele08g1628 265 MobiDBLite consensus disorder prediction 98 149 - -
Lele08g1628 265 MobiDBLite consensus disorder prediction 112 137 - -
Lele08g1628 265 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 161 240 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1628 Lele-ChrLele08 10868520 10869785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1628 30 265 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 36.713 1.61e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele08g1628 HLH 1.7e-05 No_clan