Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1621 ATGGAGGAGAAGAATAATAATCTACCTCCTGGATTCAGATTCCATCCCACAGATGAAGAGCTCATAAACTATTATCTAACGAGTAAAGTTTCTGATGCTAATGGCTTCACTTGCAAAGCTATAGCAGTGGTTGATCTCAACAAGTCTGAACCTTGGGACCTTCCTGCTAAGGCTTCCATGGGAGACAAGGAAGAATGGGTTGTTTGCAGGGTGCTCCAAAAGAGCACATCAACAGCTAGAAAACCTCAGGAGATGACATCATCGTCCCAAGTATCTCTAGATTCACCTTGTGATGCAACGAGCTCAATGGTGAACGAGCTTGCTAATTTTACTAGTCTTACAAATTCCTCAGCAGGATTCATGAACAACAACATTATACCACCAACTAATCACAACATTAATATTGGCGATCACAGTGATATAAACACAAACATGAACTTGAGCCGCGATTGGTTATCATCATCAGCTGCAGCAGAGCAAGTTCCTTCTCTTGTCCCATGGCCTGCATCAGCTTCTCGAGGGTTAATGCTTAATCCCAATCTGTCAGTGAACTCATTGCTTCTCAAAGCATTGCAGCTCAAGAACATTAATGATCCCTTTGTTGCATCATCGTACATGTCTCAAGCAGCAATTTCCAACAACCTTGGAGGAACTCATGATCATGTCAATGCTTCTCATCAGCCGGATCAACCGTTCAATCTGGACTCCGTTTGGTGA 717 0.4296 MEEKNNNLPPGFRFHPTDEELINYYLTSKVSDANGFTCKAIAVVDLNKSEPWDLPAKASMGDKEEWVVCRVLQKSTSTARKPQEMTSSSQVSLDSPCDATSSMVNELANFTSLTNSSAGFMNNNIIPPTNHNINIGDHSDINTNMNLSRDWLSSSAAAEQVPSLVPWPASASRGLMLNPNLSVNSLLLKALQLKNINDPFVASSYMSQAAISNNLGGTHDHVNASHQPDQPFNLDSVW 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1621 238 Pfam No apical meristem (NAM) protein 9 81 IPR003441 GO:0003677|GO:0006355
Lele08g1621 238 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
Lele08g1621 238 SUPERFAMILY NAC domain 6 82 IPR036093 GO:0003677|GO:0006355
Lele08g1621 238 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 64 - -
Lele08g1621 238 Gene3D NAC domain 17 90 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1621 Lele-ChrLele08 10820162 10821479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1621 1 80 NAC Transcription Factor Family AT3G18400 63.750 8.79e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele08g1621 NAM 1.5e-15 No_clan