Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1613 ATGCGACTCAGTTGCAATGGTTGCCGAGTGCTCCGCAAAGGTTGCACCACCGATTGCCCCATTCGTCCCTCCCTCCTCTGGATTCCCTCTCCTCAGTCCCAATCCAACGCCACCCTCTTCCTCGCCAAGTTCTACGGACGCGCCGGCCTCATCAACCTCATCAATTCCGGAGCTCCCCATCTGCGACCGGCGATTTTTAAGTCCTTGCTTTACGAAGCTTGTGGCCGGATTGTCAATCCCATTTTCGGCTCTGCCGGGTTACTCTCTTCCGGAAGCTGGCATCTCTGTCAGGCCGCCGTTGAAGCTGTTCTCATAGGCGAGCCCATCAAGCAGGTTTCGCCCGAATCGGCTTTTGACGGCGTCAGCCCGCTCCTGAAATCGTGTGATATTCGACATGTGGGTAAAAAAGGAAATTCGTGCGTTTCTGATAATCTCCTAAAGGTGAGAAATGGGAGCCAATTTAAACACTCCGGCGCTAAGAAGAAGAAGAAGCCGGAAGTGGAGCCGATGGGAGCGGAGTTGATGATGGCTCATTCGGGGAGCGAGTTGGATGGTTCGGGGATGAGTGAGCACAGAAGTGGAAGTCCTGGCGGTGAAGCTGATAGCAGCACCGTGGAGACGGCGGAGGGTTGGCCGGCACCGGCGAAGAGCGACGAGAGAAGCGAAGCTGAAGCCGAGGATGGGGGGTTAGAGCTGGGGTTGACTATGTGGTGGGGTCAACAAACAAAGGGGAATAGAGATATCAACGGTTCTGATGCTAGCACGTATTAG 771 0.5512 MRLSCNGCRVLRKGCTTDCPIRPSLLWIPSPQSQSNATLFLAKFYGRAGLINLINSGAPHLRPAIFKSLLYEACGRIVNPIFGSAGLLSSGSWHLCQAAVEAVLIGEPIKQVSPESAFDGVSPLLKSCDIRHVGKKGNSCVSDNLLKVRNGSQFKHSGAKKKKKPEVEPMGAELMMAHSGSELDGSGMSEHRSGSPGGEADSSTVETAEGWPAPAKSDERSEAEAEDGGLELGLTMWWGQQTKGNRDINGSDASTY 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1613 256 MobiDBLite consensus disorder prediction 180 256 - -
Lele08g1613 256 MobiDBLite consensus disorder prediction 238 256 - -
Lele08g1613 256 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Lele08g1613 256 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 194 - -
Lele08g1613 256 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Lele08g1613 256 MobiDBLite consensus disorder prediction 213 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1613 Lele-ChrLele08 10778774 10779544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1613 1 139 AS2 family AT3G02550 68.345 4.46e-68 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele08g1613 LOB 6.4e-22 No_clan