Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1586 ATGGGTGAAGCCCCCACTTGGAAGAAATCCAACTGGATTGCACAGCGGAATAATATTCTACATTCTGCAGTGCACCGACTAGCAGCATCACCAATGAGAGAGACATCACTCCCAGCACATTTTTATATTGTTTTCATTTGCAGGCACCAATTGGGAAAGGAGTCGCAAATTCAACAAATCGACCACAAGACCAACGCCATCAAAATAGGCACACCATCTTCCAACGGACACTGCAAGCCTTCTGCCCGATATCTCCGAAGATCTGGGTGTGAGCAGTGGTGGGATCTCTTAATCATCACCTTCGGCTTAGGAAAAAAGCTGCAGGAGTTGAACTATTTCCTCGTCTGCATTAAAATTCAGGATCGCATGCTCGTTTTGCTCTTCTTAGGCAATTGTTTAGTCTTCAGATCTGGTTTGATTAGTTCCTTCGATTGTTTAGCTTCATATCTAAAACTTGTTGAGCAACGTAATGGGGTTTTGATAATCATAGTGGTGGAGATGGCAAACCGACTAAAGGAAGATGAGAAGAATGAACGAATAATTCGAGGTCTTCTGAAAATTCAAGAGAATCGCAGATGTATTAATTGTGGCAGCCTGGGGCCACAATATGTGTGCACAAATTTTTGGACATTTGTTTGCACAAACTGTAGTGGAATACACCGAGAATTCACACATCGAGTTAAATCAATTTCGATGGCTAAATTTACTTCACAAGAAGTTAGTGCACTTCAGGAAGGAGGAAATCAGCGGGCAAAGGAAATTTATTTTAAAGAATGGGATCCACAACGTCATTCTCTTCCTGATAGCGGTAATATTGACAGGCTCCGGGACTTTATCAAGCATGTTTATGTGGATGGAAGATATAGTGGTGACAGGAACTATGTCAAACCACCAAGAGTTGAGGCATATCAGGGAGGATCTAAAAGCCCACCATATGAGGATGGATATGAACGTCGTTACAGTGACAGGTCTAGTCCTGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGACAATATGGTGATTATAGGAAAAGCCCAGGTCGTCCACCAATAATTAATGATTGGCGTCGTGAAGATAGATTTGGAGATGGAAGAAGATTTGAAGATCGGAGAACATCTGATGGAGATTATAAGCTGGAAGGGCAATCGCCCGAGCAAGCAAAAGATCGTGATTCTTCAAGTTCGCCTGTTGTACGGCCTGTTAGAGATATTTTGGGAGAAAATGTAGTTCCTCTTCGAATAAGTGAACCCCCCAAAACAAACAGTGGAAAGGCTGCTGATGGCTCTACACTCACACAGAGAACTGCATCTTCCAGTAGCTTAGCATCTAGTAATGGAAACGCAGCAGACGTTAAGCTTGAGACTACTAAGAGCCTTATTGATTTTGATGCTGAGCCCGAACCTCCTGTTACTCCAGCAATTCCTCAAGCTCAACCAACTACTGCTGTCCAATCTGCTGTGCAACCAGCAAATTCTAGTGATGACAACTGGGCATCTTTTGATGTTGCCCCTGCAGCAAAAACTACCCAAGGCCCTTCAAATTTAAGTCCACTTGACTCTGTTCTTTCACAACTATCAATGCCATCCCCTGCCCCTGCCCCTGCCCCTGCTCAGGTTTCTGGAGTTCAAGGGCCTCTGCCAGCATCAGCTGTGACTGCCTCTGCTGCTGGAGCTGGAGCTCTTGGCAACTTCTCACCAGTACCACCAAGTGGTACTTCTGTAACAGCCCCGGGATTGACAACAGTGCTGCCAATCAACCATGCAAGCCAGTGGGCCAGTGTGCAACACAACCAACCTGGGTTCCCTACCACTGGTAGTCATCCTGCTACTCAACAATTCATTCCATCAGCAGGCGGATCTTTGAATAGTCAGCAGTGGAGTGTATCTCCAGTGCCCACAATGCAAGGGCACCCTAGCATACAAGTGCCACATGCATTCCCTGTTGCCTCAAAACCTACCAGTGAGTTTAGCTCTAGCGCTGCTTCACAACCTTCAAAAGAAGTGCAACCAAGTGGAAGAAAAGAACTCCCCGAGGATCTCTTCACAGTAAAGTATTCATCCTTCACTTCTCCGGCTCCTGGGTGGCAAATGGGTCCTCCCTATGGCATGGGTATCTATAGGCAATATAATACTGCAGCGCCCATGCCAAGTTTTCCACAGCTATCAAAATCAACAAATCCATTTGATGTCGGGAGCGAAGCACCTCCAGTTCAAGCCCCAACATTTCCTTCCATGTCATCCTTGCAAGGTGCTCTGCCAAGTATACCGCCTTCCTCAGGTGTAATAAACCCCCTAAGCCTGGGTAATCCATCCCTTTCCTGGAGCTCACCCCAGTTATCGTATTGTTCAGTACTTACTCCACAAGCTCAAGTTCATGCACCTGCAATGGCACCAAGGCCATACGTGGTGCAACAAGTGCCAACTAACATGCCAATGCCTAGGCATCAGGAAATTGGGAATTCTGGCACACAGGGAGCTGCTTTTGGCTTCTCAAATCCAGATCAGCAGATAACTGGTATGTTCTCAACCCCTGCTGCGGCAAATTCCTTCTCTGCTGGAGGCAACCCCTTTGGATGA 2580 0.4612 MGEAPTWKKSNWIAQRNNILHSAVHRLAASPMRETSLPAHFYIVFICRHQLGKESQIQQIDHKTNAIKIGTPSSNGHCKPSARYLRRSGCEQWWDLLIITFGLGKKLQELNYFLVCIKIQDRMLVLLFLGNCLVFRSGLISSFDCLASYLKLVEQRNGVLIIIVVEMANRLKEDEKNERIIRGLLKIQENRRCINCGSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSISMAKFTSQEVSALQEGGNQRAKEIYFKEWDPQRHSLPDSGNIDRLRDFIKHVYVDGRYSGDRNYVKPPRVEAYQGGSKSPPYEDGYERRYSDRSSPGGRSPGYDQESRQYGDYRKSPGRPPIINDWRREDRFGDGRRFEDRRTSDGDYKLEGQSPEQAKDRDSSSSPVVRPVRDILGENVVPLRISEPPKTNSGKAADGSTLTQRTASSSSLASSNGNAADVKLETTKSLIDFDAEPEPPVTPAIPQAQPTTAVQSAVQPANSSDDNWASFDVAPAAKTTQGPSNLSPLDSVLSQLSMPSPAPAPAPAQVSGVQGPLPASAVTASAAGAGALGNFSPVPPSGTSVTAPGLTTVLPINHASQWASVQHNQPGFPTTGSHPATQQFIPSAGGSLNSQQWSVSPVPTMQGHPSIQVPHAFPVASKPTSEFSSSAASQPSKEVQPSGRKELPEDLFTVKYSSFTSPAPGWQMGPPYGMGIYRQYNTAAPMPSFPQLSKSTNPFDVGSEAPPVQAPTFPSMSSLQGALPSIPPSSGVINPLSLGNPSLSWSSPQLSYCSVLTPQAQVHAPAMAPRPYVVQQVPTNMPMPRHQEIGNSGTQGAAFGFSNPDQQITGMFSTPAAANSFSAGGNPFG 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1586 859 MobiDBLite consensus disorder prediction 650 675 - -
Lele08g1586 859 MobiDBLite consensus disorder prediction 423 450 - -
Lele08g1586 859 PANTHER ARFGAP/RECO-RELATED 167 859 IPR044820 GO:0005096
Lele08g1586 859 MobiDBLite consensus disorder prediction 464 499 - -
Lele08g1586 859 Pfam Putative GTPase activating protein for Arf 179 289 IPR001164 GO:0005096
Lele08g1586 859 PRINTS HIV Rev interacting protein signature 190 209 IPR001164 GO:0005096
Lele08g1586 859 PRINTS HIV Rev interacting protein signature 209 226 IPR001164 GO:0005096
Lele08g1586 859 PRINTS HIV Rev interacting protein signature 227 248 IPR001164 GO:0005096
Lele08g1586 859 SMART arf_gap_3 178 296 IPR001164 GO:0005096
Lele08g1586 859 MobiDBLite consensus disorder prediction 294 450 - -
Lele08g1586 859 MobiDBLite consensus disorder prediction 652 670 - -
Lele08g1586 859 MobiDBLite consensus disorder prediction 596 636 - -
Lele08g1586 859 FunFam Arf-GAP domain and FG repeat-containing protein 1 167 301 - -
Lele08g1586 859 Gene3D Arf GTPase activating protein 167 297 IPR038508 -
Lele08g1586 859 CDD ArfGap_AGFG 178 288 - -
Lele08g1586 859 MobiDBLite consensus disorder prediction 477 499 - -
Lele08g1586 859 SUPERFAMILY ArfGap/RecO-like zinc finger 177 289 IPR037278 -
Lele08g1586 859 MobiDBLite consensus disorder prediction 351 388 - -
Lele08g1586 859 ProSiteProfiles ARF GTPase-activating proteins domain profile. 178 302 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1586 Lele-ChrLele08 10494245 10512355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1586 178 311 C2H2 Transcription Factor Family AT4G21160 31.206 1.41e-12 68.2