Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1565 ATGTCAAGCTCGCCTCCTCCCGGAGCTTCTCCGGCCCCCACATCGCCGCCAGCTACTAACACAACTTCTCCTCCTCCGCCCGCTACTAACACAACCTCTCCTCCTCCACCCTCGGCCACCCCTACTGCACCACCTCCTTCTACTCCCTCCTCTCCACCCCCGGCTACTCCTTCGCCTCCTCCACCGGCCACGGCCACTCCCAGCCCTCCGTCTCCATCCACACCTTCAACCTCGCCACCGCCGCCTACGTCTGGTACCAATTCTCCACCGCCTCCGGTGACTCGGAGCTCGCCTCCTCCTCCTCCGTCCAGTTCATCCACGCCTTCAACTCCGACTCGAAGCCCGCCTCCACCGCCTTCGTCCCCTTCTTCGTCGCCGAATATACCAACTGGTGTTATTGTTGGAATCGCCGTTGGTGCTGTGGCGATTCTAGTATTTTTAAGCCTTGTATGCATATGTTGTCGGAGGAAGAAGAGGAGAACAAGTAATGCGGGATACTATGTCCCGCCACAGGGACCTAAAGGTGACCAATATGGTGGCCCACCGCGTCAATGGCCGCATAATGCTCCCCCTCCTTCAGATAATGTTGTATCCGTGATGCAAAAGCCCCCACCACCGCCACCAGGTGCATCACGACCATCCCAATCACCAGCTTATGACCCTAAACCTCCTCCGCCACCACTATTCCTGAGCAGCAGCGGTGGCTCAGGTTCCAACTATACAGGTGGCGAAAATCCACTCCCACCCCCTTCTCCTGGCATTGCATTGGGTTTTTCAAAGAGCACATTTACATATGAAGAGTTGATGTTTGGGATTGGTTGCAAGAATCTGACAGATATATCTACTGCAGGAAAAGGGCGACCTACTATGGATTGGCCCACAAGACTGAAAATTGCACTAGGATCAGCGAAAGGACTGGCGTATCTCCATGAGGATTGTCATCCTAAGATCATCCATCGTGATATCAAAGCTTCTAATATACTTCTGGATTTCAAGTTTGAAGCAAAGGTTGCTGATTTTGGACTAGCGAAGTTTTCTTCTGATGTCAATACTCATGTTTCCACTCGAGTGATGGGGACTTTTGGGTATCTGGCTCCAGAATATGCTTCCAGTGGGAAACTCACAGACAAATCAGATGTTTTCTCCTTCGGGGTCATGCTTCTGGAGCTAATTACTGGACGTCGACCGGTTGACACAACTCATTCTTTCATGGAGGATAGTCTGGTAGACTGGGCAAGGCCTTTGCTTATCCGTGCTTTGGAAGAACATGATTTTGATTCTGTGGTTGATCCAAGGCTCAAAGATGAATATGACCCCAATGAAATGACTCGCATGGTTGCATGTGCTGCAGCCTGCACCCGTCATTCGGCACGTCATAGACCAAAAGTGAGCCAGGTTGTCCGTGCTCTGGAAGGAGATATGTCTCTATCAGATCTGAACGAAGGAATTAAACCTGGACACAGCTCTGCCTACAGTTTCCGAGGAAGCTCTGATTATGACACTGCACAATACAAGGAAGACATGAAAAAATTCAGGAAAATGGCTTTAGGAACCCAGGAGCTTGGCGTTAGCAGTGAATACAGTGCACGTACAACTGACAACAGCTTATACCCATCTGGCTCAAGCAGCGAAGGCCAGAGCCGCCAGACCACCCAGGAAATGGAAATGAGAAAGATGAATAACCACCAAGCTTACAGTGGAAGCTCTTGA 1710 0.5105 MSSSPPPGASPAPTSPPATNTTSPPPPATNTTSPPPPSATPTAPPPSTPSSPPPATPSPPPPATATPSPPSPSTPSTSPPPPTSGTNSPPPPVTRSSPPPPPSSSSTPSTPTRSPPPPPSSPSSSPNIPTGVIVGIAVGAVAILVFLSLVCICCRRKKRRTSNAGYYVPPQGPKGDQYGGPPRQWPHNAPPPSDNVVSVMQKPPPPPPGASRPSQSPAYDPKPPPPPLFLSSSGGSGSNYTGGENPLPPPSPGIALGFSKSTFTYEELMFGIGCKNLTDISTAGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKASNILLDFKFEAKVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDTTHSFMEDSLVDWARPLLIRALEEHDFDSVVDPRLKDEYDPNEMTRMVACAAACTRHSARHRPKVSQVVRALEGDMSLSDLNEGIKPGHSSAYSFRGSSDYDTAQYKEDMKKFRKMALGTQELGVSSEYSARTTDNSLYPSGSSSEGQSRQTTQEMEMRKMNNHQAYSGSS 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1565 569 ProSiteProfiles Protein kinase domain profile. 163 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1565 569 Gene3D Transferase(Phosphotransferase) domain 1 275 481 - -
Lele08g1565 569 FunFam Proline-rich receptor-like protein kinase PERK1 274 481 - -
Lele08g1565 569 PRINTS Proline rich extensin signature 5 17 - -
Lele08g1565 569 PRINTS Proline rich extensin signature 42 54 - -
Lele08g1565 569 PRINTS Proline rich extensin signature 20 36 - -
Lele08g1565 569 PRINTS Proline rich extensin signature 54 75 - -
Lele08g1565 569 SUPERFAMILY Protein kinase-like (PK-like) 275 471 IPR011009 -
Lele08g1565 569 Pfam Protein kinase domain 297 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1565 569 MobiDBLite consensus disorder prediction 1 127 - -
Lele08g1565 569 SMART serkin_6 144 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1565 569 MobiDBLite consensus disorder prediction 1 125 - -
Lele08g1565 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Lele08g1565 569 MobiDBLite consensus disorder prediction 163 253 - -
Lele08g1565 569 MobiDBLite consensus disorder prediction 524 569 - -
Lele08g1565 569 MobiDBLite consensus disorder prediction 197 230 - -
Lele08g1565 569 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 283 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1565 Lele-ChrLele08 10307712 10311623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1565 284 552 Trihelix Transcription Factor Family AT1G70460 59.108 1.18e-103 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele08g1565 Pkinase 1e-25 CL0016