Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1555 ATGGGAGAAGGAGACGGGGTTGATTTCCCTCCGAAGAATATGTTGTTGGCCTCTGCTGCCGCAGCGTTGCTGTTGGATGGTTCAGGGAAGAAGCTAGCGAGGCAGCTCGATTTTACGGGTTTTGGTGGGGTATCGGGTACTGTGGCTTCAAGGGAACATCCGCAATTGCAACTGCAGCCTCAGTCACGTCCACAGTCACTGCCTCAGGGACTGACACAGCAAACCATGGTTGTGATGCCAGTGCCGTCACAGGTACCTCATTCTTCAGTGAGGGTTGGGAAACCAGAATCTCCAAAATCAAGATCAAGACCTAACTTTGAAATGAAAGACTCTACTCCAAAGAAGCAAAAACAGTGCAATTGTAAACATTCAAGATGCTTAAAGTTATACTGCGAATGTTTTGCATCAGGAATATATTGTGAGGGGTGCAATTGTGTAAATTGTTTTAACAATGTTGAGAATGATGCGGCAAGACGGGAGGCTGTTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCAAAAATTGCAAGCAGTCCTCATGGAACACGTAATAGCAGGGAGGAGACTGGAGAAGTTTTATTATTGGGAAAGCACAACAAGGGCTGCCACTGTAAAAAATCAGGATGCCTCAAAAAGTACTGTGAATGCTTCCAAGCCAACATTCTTTGCTCTGAAAATTGCAAATGCCTGGACTGCAAAAATTTTGATGGAAGTGAAGAAAGACAAGCTTTATTCCACGGAGATCAAAATAACAATATAGCATTTATTCAGCAGGCAGCAAATGCTGCCATAACTGGAGCTATTGGATCCTCTGGTTATTCATCCCCTCCAGTATCCAAGAAAAGAAAAGGTCAGGAACACTTTTTTGGGCCAACAGTCAAGGATCCATCTATTGGCAGGCTTGGGCAGTTTCAACAGGCAAACAATGTCGGAGTTCCTGCACCTTCCTCTTCCTTGTCTTGCGTCCCTGGTGCTTGGGTTGGAAGTGCTGCAGTAGGTCCTTCAAAATTTGCATACAGGTCTCTTTTAGCGGACATCATACAACCACAGTACTTGAAGGAACTTTGCTCTGTTCTGGTGCTAGTATCAGGACAGGCAGCGAAGACACTCTCAGGACCAGATCAGAAAAAATTACTGGACAAGCAGCGAATTGAGGATCAGACTGAGACTGCCCTTGCTTCATCAACTCAACAGCAATTGCCTAGTCAAATGGAGACTAACGTCAAGAAAACTATGGCTGATGATTGTTTGAGTGCAAACCAGACAGATAAAATCGGCCCAGATGATTCCAGTTCAGATGGTGCTGATGTCTCAAAGGGGTGGCCAATGTCTCCTGGAACTTTAGCCTTGATGTGCGATGAGCAAGATGCAATGTTCATGACAGCTCCCTCTCCTAGTGGTTTGATGGCCAATGCCGGCAACACATCTTCACAGTCTACTTGTGGACAAGGCATGACAGAGGTGCATGCAGAGCAAGAAAGGATTGTATTGACAAAGTTCAGAGATTTTCTAAATAGGTTGATCACTATGGGAGAAATAAATGAAACAAAGTGTTCTTCATTAGCTAGAAGTGTATTGGAGACTCAAAAGGAGACAGTCAGCAATAATGTAGGAAATCCAAGTACTAAGACAACACATCAGCTGTTTGCCACTAGTAATGGTTGTGCCAAAGCTGCAGTCCCACCAATGGCCACAAGTATGAACAAAATAACTTCAATAGCTTTAATTCCTAATAATATTATTCCTGAAAATGGGGAAAGTAGGTCAAAGATCGAAAAGGAGACATGA 1794 0.4398 MGEGDGVDFPPKNMLLASAAAALLLDGSGKKLARQLDFTGFGGVSGTVASREHPQLQLQPQSRPQSLPQGLTQQTMVVMPVPSQVPHSSVRVGKPESPKSRSRPNFEMKDSTPKKQKQCNCKHSRCLKLYCECFASGIYCEGCNCVNCFNNVENDAARREAVEATLERNPNAFRPKIASSPHGTRNSREETGEVLLLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCLDCKNFDGSEERQALFHGDQNNNIAFIQQAANAAITGAIGSSGYSSPPVSKKRKGQEHFFGPTVKDPSIGRLGQFQQANNVGVPAPSSSLSCVPGAWVGSAAVGPSKFAYRSLLADIIQPQYLKELCSVLVLVSGQAAKTLSGPDQKKLLDKQRIEDQTETALASSTQQQLPSQMETNVKKTMADDCLSANQTDKIGPDDSSSDGADVSKGWPMSPGTLALMCDEQDAMFMTAPSPSGLMANAGNTSSQSTCGQGMTEVHAEQERIVLTKFRDFLNRLITMGEINETKCSSLARSVLETQKETVSNNVGNPSTKTTHQLFATSNGCAKAAVPPMATSMNKITSIALIPNNIIPENGESRSKIEKET 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1555 597 MobiDBLite consensus disorder prediction 94 113 - -
Lele08g1555 597 MobiDBLite consensus disorder prediction 421 442 - -
Lele08g1555 597 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 116 151 IPR005172 -
Lele08g1555 597 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 202 236 IPR005172 -
Lele08g1555 597 SMART CXC_2 114 154 IPR033467 -
Lele08g1555 597 SMART CXC_2 199 240 IPR033467 -
Lele08g1555 597 PANTHER TESMIN/TSO1-RELATED 52 515 IPR028307 -
Lele08g1555 597 MobiDBLite consensus disorder prediction 83 113 - -
Lele08g1555 597 ProSiteProfiles CRC domain profile. 115 239 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1555 Lele-ChrLele08 10239410 10244715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1555 1 525 CPP Transcription Factor Family AT4G29000 56.466 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lele08g1555 TCR 2.8e-12 No_clan