Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1552 ATGAGTGCTTCGAAGTTCATTAAATGTGTCACTGTTGGAGATGGAGCTGTCGGCAAGACCTGCATGCTCATCTGCTACACCAGCAACAAGTTCCCTACTGACTATATACCCACGGTATTCGACAACTTTAGTGCCAATGTGGCCGTGGATGGGAACATTGTCAATTTAGGACTCTGGGACACAGCAGTTGTGATTATGGTTTTTGAAGGTCAGGAAGATTACAGCAGGTTGAGACCACTGAGCTACAGAGGTGCAGACATTTTTGTGTTGGCATTCTCATTGATTAGTAGAGCAAGCTACGAAAATGTTCTTAAGAAGTGGATGCCAGAACTGCGAAGATTTGCACCTAATGTTCCAATTGTTCTTGTTGGTACAAAGTTAGGGGGAAGAACTGAGGAATCAAATAGGCGCAGCGGCTTATATCGAGTGCAGTTCAAAGACTCAACAGAAGCATCGTGTGTGGAAGCTGTGCAGCTTATTAATACACATCAAAAGCATCATTACCAACCTACTTTTGATATGGTAGTTGCCTTGGAAAAGAAAGCGATCAAGGATTTGATTTCTTCATCAGTCTTGACTTGGGTAACAGTCTTTGTTCCGATGTCGGACATGGACCCTCCTCCCAAGAGCTGGAGCATCTACACACGAGCTGAGATTATCGCCAAGTACCAAGTCATGGAGCGGGTCGGTTCTGGAGCTTACTCCGATGTCTACAAAGGCCGTCGTCTCTCCGATGACCTCATCGTCGCGCTCAAAGAAGTTCACGATTACCAATCTGCCAACCGAGAAATCGAGGCCTTGCAGATCCTCCAGGGGTCCCCTAACGTCGTCGTCTTGCACGAGTACTTCTGGCGCGAGGACGAGGACGCCGTCCTCGTTCTCGAGTTTTTGAGAACTGACTTGTTGACGGTCATCAAAGATGCCAAGAAGGAGGGTGCGGGTCTAAGCGTTGGGGAGATTAAGCAGTGGATGATCCAGATTCTTTGCGGCGTCGATGCGTGCCACGCAAATATGATCATGCATCGAGATTTGAAGCCCAGTAATTTGTTGATTTCAGAGGATGGCGTGCTAAAGTTGGCTGATTTTGGACAGGCGAGGATACTTATGGAGCCTGGATTTCATGCTATGGATGAAAACCCCGAACCTTATGAAGATGACATTTCAAATAATGAGAGATATCCTCAACGTCCTGAAGTATTTCCTCAGACACACTACCAAAACCAAGAGGGCTATGGAAATCAAGAACAGGGAACTGTAACTCAAGATGAATATTATAGAGAATTAGGAGAGATAAAAACTAAGAGCTCCACAGATGACATGGATAAGGATACGAACTTCCAGGATGGAAATACATCTTGTTTTGCAACTTGCACAATAAGTGACATAGAAGATGATTTTATGAAGGGTTCGTTTACTTATGAAGCAGATGTCAGAGACAGTGAAGAAGATTGTCTCACATCATGCGTGGGAACCCGATGGTACAGGGCTTCTGAACTGCTTTATGGATCAGTTGACTATGGGTTAGAGATTGATCTCTGGTCATTGGGCTGCATCTTTGCAGAGCTCCTAACTCTGGAGCCCTTATTTCCTGGGGCAGGTGACATTGATCAGCTCAGCAGAATTATTGATGTTTTAGGCAACCTCAATGAGGAAGTTTGGTCTGGTTGTTCCAAGCTTCGTGATTATGAAAAAATCTCGTTCACCAAGGTGGAGAACACTCCAGGTATTGAAGGCTGCCTGCCAAACCGATCCCCGGATGAAGTCTCTCTAGTGAAGAAACTGGTCTGTTATGATCCGGCTAGAAGAGCTACTGCAATGGAACTTCTCCGAGACAAGTATTTTGGTGAAGAACCTCTTCCTGTACCTGTTTCTGAGCTGCGAGTTCCTTTGACAAAAACTTCACACGATGAAGACTCTGGTCATAATCTCAATGATGTGGATTTCGATTCTGATTGA 1956 0.4525 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGNIVNLGLWDTAVVIMVFEGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKLGGRTEESNRRSGLYRVQFKDSTEASCVEAVQLINTHQKHHYQPTFDMVVALEKKAIKDLISSSVLTWVTVFVPMSDMDPPPKSWSIYTRAEIIAKYQVMERVGSGAYSDVYKGRRLSDDLIVALKEVHDYQSANREIEALQILQGSPNVVVLHEYFWREDEDAVLVLEFLRTDLLTVIKDAKKEGAGLSVGEIKQWMIQILCGVDACHANMIMHRDLKPSNLLISEDGVLKLADFGQARILMEPGFHAMDENPEPYEDDISNNERYPQRPEVFPQTHYQNQEGYGNQEQGTVTQDEYYRELGEIKTKSSTDDMDKDTNFQDGNTSCFATCTISDIEDDFMKGSFTYEADVRDSEEDCLTSCVGTRWYRASELLYGSVDYGLEIDLWSLGCIFAELLTLEPLFPGAGDIDQLSRIIDVLGNLNEEVWSGCSKLRDYEKISFTKVENTPGIEGCLPNRSPDEVSLVKKLVCYDPARRATAMELLRDKYFGEEPLPVPVSELRVPLTKTSHDEDSGHNLNDVDFDSD 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1552 651 Pfam Protein kinase domain 223 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1552 651 Pfam Protein kinase domain 482 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1552 651 SMART rab_sub_5 7 182 - -
Lele08g1552 651 Gene3D Transferase(Phosphotransferase) domain 1 215 412 - -
Lele08g1552 651 PANTHER CELL DIVISION PROTEIN KINASE 222 620 - -
Lele08g1552 651 FunFam Cyclin-dependent kinase F-1 214 308 - -
Lele08g1552 651 Gene3D - 1 193 IPR027417 -
Lele08g1552 651 SMART ras_sub_4 4 181 - -
Lele08g1552 651 MobiDBLite consensus disorder prediction 631 651 - -
Lele08g1552 651 ProSitePatterns Protein kinases ATP-binding region signature. 229 252 IPR017441 GO:0005524
Lele08g1552 651 SUPERFAMILY Protein kinase-like (PK-like) 207 632 IPR011009 -
Lele08g1552 651 ProSiteProfiles small GTPase Ras family profile. 2 279 IPR001806 GO:0003924|GO:0005525
Lele08g1552 651 SMART serkin_6 223 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1552 651 ProSiteProfiles small GTPase Rho family profile. 1 195 - -
Lele08g1552 651 SMART rho_sub_3 9 180 IPR001806 GO:0003924|GO:0005525
Lele08g1552 651 Pfam Ras family 8 131 IPR001806 GO:0003924|GO:0005525
Lele08g1552 651 TIGRFAM small_GTP: small GTP-binding protein domain 6 154 IPR005225 GO:0005525
Lele08g1552 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 339 351 IPR008271 GO:0004672|GO:0006468
Lele08g1552 651 ProSiteProfiles small GTPase Rab1 family profile. 2 231 - -
Lele08g1552 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 132 IPR027417 -
Lele08g1552 651 PRINTS Transforming protein P21 ras signature 47 69 - -
Lele08g1552 651 PRINTS Transforming protein P21 ras signature 30 46 - -
Lele08g1552 651 PRINTS Transforming protein P21 ras signature 116 129 - -
Lele08g1552 651 PRINTS Transforming protein P21 ras signature 7 28 - -
Lele08g1552 651 ProSiteProfiles Protein kinase domain profile. 223 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1552 651 Gene3D Transferase(Phosphotransferase) domain 1 452 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1552 Lele-ChrLele08 10212485 10219594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1552 207 651 Core Cell Cycle Gene Families AT4G28980 63.297 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Lele08g1552 Pkinase 9.8e-33 CL0016